RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 PRPF19Q9UMS4 504 aaKnown RBP12.72□□□□□ -0.37
SNX29-203ENST00000564111 RENP00797 406 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 ZNF16P17020 682 aaPredicted RBP12.72□□□□□ -0.37
SNX29-203ENST00000564111 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
SNX29-203ENST00000564111 LAP3P28838 519 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 RGS6P49758 472 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 TMEM33P57088 247 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 SLC36A3Q495N2 470 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 MESTQ5EB52 335 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 TBPL2Q6SJ96 375 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 DEFB107AQ8IZN7 70 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 CCDC197Q8NCU1 140 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 OR1J1Q8NGS3 322 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 FOXN4Q96NZ1 517 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 FUZQ9BT04 418 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 BPESC1Q9GZL8 116 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 ACTR3BQ9P1U1 418 aa12.72□□□□□ -0.37
SNX29-203ENST00000564111 C17orf100A8MU93 164 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 CDC42EP2O14613 210 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 FAM107AO95990 144 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 FAM157CP0CG43 387 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 CALB2P22676 271 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 CDAP32320 146 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 PSG4Q00888 419 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 RIN1Q13671 783 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 KCNMB1Q16558 191 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 TSEN54Q7Z6J9 526 aaKnown RBP12.71□□□□□ -0.37
SNX29-203ENST00000564111 JAZF1Q86VZ6 243 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 Q96M85 177 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 SHARPINQ9H0F6 387 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 WNT5BQ9H1J7 359 aa12.71□□□□□ -0.37
SNX29-203ENST00000564111 PLSCR5A0PG75 271 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ARPC3O15145 178 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 LMX1BO60663 402 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ALDH3B1P43353 468 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
SNX29-203ENST00000564111 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 EGLN1Q9GZT9 426 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ADAM21Q9UKJ8 722 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 NF1P21359 2839 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 TRBV4-1A0A0J9YWV2 114 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 C5orf49A4QMS7 147 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 LY6HO94772 140 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ADH4P08319 380 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
SNX29-203ENST00000564111 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 LINC01356Q8N9X3 169 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 OR52L1Q8NGH7 329 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 CCT8L2Q96SF2 557 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 TBCCD1Q9NVR7 557 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
SNX29-203ENST00000564111 SETD2Q9BYW2 2564 aaPredicted RBP12.7□□□□□ -0.38
SNX29-203ENST00000564111 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 LOC100289279A0A1B0GTE1 492 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 SGCEO43556 437 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 DOK2O60496 412 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 TCN1P20061 433 aaPredicted RBP12.69□□□□□ -0.38
SNX29-203ENST00000564111 RRM2P31350 389 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 PPP1CBP62140 327 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 TSPAN31Q12999 210 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 RFX4Q33E94 735 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 AKR7LQ8NHP1 331 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 ELMOD3Q96FG2 381 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 BEX2Q9BXY8 128 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 DECR2Q9NUI1 292 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 OR10H3O60404 316 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 CCNOP22674 350 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 ELFN2Q5R3F8 820 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 PAQR4Q8N4S7 273 aaPredicted RBP12.69□□□□□ -0.38
SNX29-203ENST00000564111 TIMD4Q96H15 378 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 C4orf45Q96LM5 186 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 BAIAP2Q9UQB8 552 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 POLR1DQ9Y2S0 133 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 IER3IP1Q9Y5U9 82 aa12.69□□□□□ -0.38
SNX29-203ENST00000564111 ZNF469Q96JG9 3925 aaPredicted RBP12.68□□□□□ -0.38
SNX29-203ENST00000564111 MAP1AP78559 2803 aaPredicted RBP12.68□□□□□ -0.38
SNX29-203ENST00000564111 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
SNX29-203ENST00000564111 TNFSF4P23510 183 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 HTR5AP47898 357 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 GSSP48637 474 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 ZNF81P51508 661 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 LCN8Q6JVE9 175 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 C1orf94Q6P1W5 598 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 FAM86B1Q8N7N1 296 aa12.68□□□□□ -0.38
SNX29-203ENST00000564111 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms