RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SLC16A7O60669 478 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 CCNB2O95067 398 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 RENP00797 406 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 CTLA4P16410 223 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 CCNOP22674 350 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 AQP6Q13520 282 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 ENDOGQ14249 297 aaKnown RBP17.08■□□□□ 0.32
CMTM3-207ENST00000564060 OR2T5Q6IEZ7 315 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 ARL9Q6T311 187 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 Q71RC1 249 aaPredicted RBP17.08■□□□□ 0.32
CMTM3-207ENST00000564060 PAQR4Q8N4S7 273 aaPredicted RBP17.08■□□□□ 0.32
CMTM3-207ENST00000564060 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 CPEB3Q8NE35 698 aaKnown RBP17.08■□□□□ 0.32
CMTM3-207ENST00000564060 OR2T29Q8NH02 315 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 AKR7LQ8NHP1 331 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 CLPTM1LQ96KA5 538 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 POM121L2Q96KW2 1035 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 SYT3Q9BQG1 590 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 IFT27Q9BW83 186 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 RERGLQ9H628 205 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 REV1Q9UBZ9 1251 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 DUSP13Q9UII6 198 aa17.08■□□□□ 0.32
CMTM3-207ENST00000564060 SAMHD1Q9Y3Z3 626 aaKnown RBP17.08■□□□□ 0.32
CMTM3-207ENST00000564060 C5orf49A4QMS7 147 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 AQP12BA6NM10 295 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 LY6HO94772 140 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 ADRA2AP08913 450 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 COX5BP10606 129 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 KLF3P57682 345 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-207ENST00000564060 LSM6P62312 80 aaKnown RBP17.07■□□□□ 0.32
CMTM3-207ENST00000564060 PPP2R2BQ00005 443 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 LOXL1Q08397 574 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-207ENST00000564060 MOGQ16653 247 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 PTCHD4Q6ZW05 846 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 AQP12AQ8IXF9 295 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 SYNPRQ8TBG9 265 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 SNX33Q8WV41 574 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 OR51B6Q9H340 312 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 SLCO1C1Q9NYB5 712 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 CDH10Q9Y6N8 788 aa17.07■□□□□ 0.32
CMTM3-207ENST00000564060 MT-ND5P03915 603 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 DAOP14920 347 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 ZNF250P15622 560 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 NKPD1Q17RQ9 610 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 MSMPQ1L6U9 139 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 LEG1Q6P5S2 330 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 MAPK1IP1LQ8NDC0 245 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 ICA1LQ8NDH6 482 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 OR9Q2Q8NGE9 314 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 OR4C15Q8NGM1 316 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 OR1J1Q8NGS3 322 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 BTBD10Q9BSF8 475 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 NUAK2Q9H093 628 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 WNT5BQ9H1J7 359 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 ELOVL3Q9HB03 270 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 EMC7Q9NPA0 242 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 COA3Q9Y2R0 106 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-207ENST00000564060 ABCA1O95477 2261 aa17.06■□□□□ 0.32
CMTM3-207ENST00000564060 SETD2Q9BYW2 2564 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-207ENST00000564060 HIVEP2P31629 2446 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 IGLV3-9A0A075B6K5 115 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 DHRS12A0PJE2 317 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 ACOT8O14734 319 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 DOK2O60496 412 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 ICMTO60725 284 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 GSTM3P21266 225 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 CDKN2AP42771 156 aaKnown RBP17.05■□□□□ 0.32
CMTM3-207ENST00000564060 ARHGDIAP52565 204 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 FLOT2Q14254 428 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 CARTPTQ16568 116 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 MICAQ29983 383 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 ZNF774Q6NX45 483 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 RASSF6Q6ZTQ3 369 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 AQP11Q8NBQ7 271 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 RACGAP1Q9H0H5 632 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 YY1AP1Q9H869 796 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 IL20Q9NYY1 176 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 FZR1Q9UM11 496 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 POLR1DQ9Y2S0 133 aa17.05■□□□□ 0.32
CMTM3-207ENST00000564060 CSPG4Q6UVK1 2322 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 TLN2Q9Y4G6 2542 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 LOC100509620A0A075B734 347 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 A0A096LNT2 108 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 H3BSA7 217 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 SGCEO43556 437 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 TLX2O43763 284 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-207ENST00000564060 DNAJC8O75937 253 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-207ENST00000564060 HIST1H1CP16403 213 aaKnown RBP17.04■□□□□ 0.32
CMTM3-207ENST00000564060 USF1P22415 310 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-207ENST00000564060 GCH1P30793 250 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 ALDH3B1P43353 468 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 CENPAP49450 140 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 RASSF2P50749 326 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 GLO1Q04760 184 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 KCNMB1Q16558 191 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 ZNF718Q3SXZ3 478 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 ZNF770Q6IQ21 691 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-207ENST00000564060 UGT2A3Q6UWM9 527 aa17.04■□□□□ 0.32
CMTM3-207ENST00000564060 LRP11Q86VZ4 500 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms