RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 APEX1P27695 318 aaKnown RBP11.54□□□□□ -0.56
CLK3-213ENST00000563842 PDLIM4P50479 330 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 UCP2P55851 309 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
CLK3-213ENST00000563842 PSG4Q00888 419 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 SCRN3Q0VDG4 424 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 FLOT2Q14254 428 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 MOGQ16653 247 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 MICAQ29983 383 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 ARL9Q6T311 187 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 ZNF620Q6ZNG0 422 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 RASSF6Q6ZTQ3 369 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 SPATA24Q86W54 205 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 GLB1L2Q8IW92 636 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 CIARTQ8N365 385 aaPredicted RBP11.54□□□□□ -0.56
CLK3-213ENST00000563842 SVOPLQ8N434 492 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 OR10H5Q8NGA6 315 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 OR4C15Q8NGM1 316 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 C11orf40Q8WZ69 217 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 ZNF416Q9BWM5 594 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 CHID1Q9BWS9 393 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 OR2H1Q9GZK4 316 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 RERGLQ9H628 205 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 NDRG4Q9ULP0 352 aaKnown RBP11.54□□□□□ -0.56
CLK3-213ENST00000563842 CDH10Q9Y6N8 788 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 TMEM129A0AVI4 362 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 M0R233 179 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 NDUFS8O00217 210 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 GPRIN2O60269 458 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 GASTP01350 101 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 LCKP06239 509 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 HEXAP06865 529 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 FAM157BP0CG42 384 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 COX5BP10606 129 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CCL2P13500 99 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CTLA4P16410 223 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CCNOP22674 350 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CDKN2AP42771 156 aaKnown RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 BNIP1Q12981 228 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 AQP6Q13520 282 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 ENDOGQ14249 297 aaKnown RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 LEG1Q6P5S2 330 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 PTCHD4Q6ZW05 846 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 ADGRG5Q8IZF4 528 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 AQP11Q8NBQ7 271 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CPEB3Q8NE35 698 aaKnown RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 OR9Q2Q8NGE9 314 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 AKR7LQ8NHP1 331 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 CANT1Q8WVQ1 401 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 POM121L2Q96KW2 1035 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 SORCS2Q96PQ0 1159 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 DGCR6LQ9BY27 220 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 NUAK2Q9H093 628 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 MMADHCQ9H3L0 296 aaPredicted RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
CLK3-213ENST00000563842 COA3Q9Y2R0 106 aaPredicted RBP11.53□□□□□ -0.56
CLK3-213ENST00000563842 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
CLK3-213ENST00000563842 LOC390937A0A1W2PQ73 354 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 C5orf49A4QMS7 147 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 GSC2O15499 205 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 HIST1H1CP16403 213 aaKnown RBP11.52□□□□□ -0.57
CLK3-213ENST00000563842 CENPAP49450 140 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 ARHGDIAP52565 204 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.57
CLK3-213ENST00000563842 GLO1Q04760 184 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 COX10Q12887 443 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 SLC36A3Q495N2 470 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 ZNF770Q6IQ21 691 aaPredicted RBP11.52□□□□□ -0.57
CLK3-213ENST00000563842 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
CLK3-213ENST00000563842 ZNF525Q8N782 197 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 ZNF540Q8NDQ6 660 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 OR4K13Q8NH42 304 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 SYNPRQ8TBG9 265 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 GIPC3Q8TF64 312 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 RACGAP1Q9H0H5 632 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 WNT5BQ9H1J7 359 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 SLCO1C1Q9NYB5 712 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 REV1Q9UBZ9 1251 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 B9D1Q9UPM9 204 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 BAIAP2Q9UQB8 552 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 POMPQ9Y244 141 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 POLR1DQ9Y2S0 133 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 U3KQV3 271 aa11.52□□□□□ -0.57
CLK3-213ENST00000563842 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
CLK3-213ENST00000563842 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 ARRDC5A6NEK1 342 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 SGCEO43556 437 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 MT-ND5P03915 603 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
CLK3-213ENST00000563842 ADRA2AP08913 450 aa11.51□□□□□ -0.57
CLK3-213ENST00000563842 ZNF250P15622 560 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms