RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SLC36A3Q495N2 470 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 HIST2H3PS2Q5TEC6 136 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 AGAP6Q5VW22 663 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 KRT80Q6KB66 452 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 ACSM5Q6NUN0 579 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 ZNF774Q6NX45 483 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FAHD1Q6P587 224 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 VHLLQ6RSH7 139 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 HIST2H3AQ71DI3 136 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 AMIGO2Q86SJ2 522 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 SYT9Q86SS6 491 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FBXL14Q8N1E6 418 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 IQCF1Q8N6M8 205 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 CYB561A3Q8NBI2 242 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 SLC37A3Q8NCC5 494 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 SLC30A7Q8NEW0 376 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 WFDC11Q8NEX6 87 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 SLC26A10Q8NG04 563 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 OR52L1Q8NGH7 329 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 LRTOMTQ8WZ04 291 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 C11orf40Q8WZ69 217 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 PERPQ96FX8 193 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 POM121L2Q96KW2 1035 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 RBM4Q9BWF3 364 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 NMNAT2Q9BZQ4 307 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 RACGAP1Q9H0H5 632 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 RERGLQ9H628 205 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 ZNF442Q9H7R0 627 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 RNF121Q9H920 327 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 SRA1Q9HD15 236 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 RPRD1BQ9NQG5 326 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 CBLN4Q9NTU7 201 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 TBC1D23Q9NUY8 699 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FBXL3Q9UKT7 428 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 TIMM10BQ9Y5J6 103 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FKBP7Q9Y680 259 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 USF3Q68DE3 2245 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 HEATR1Q9H583 2144 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 DNHD1Q96M86 4753 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 C12orf71A8MTZ7 269 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CIB2O75838 187 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 SNAP29O95721 258 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 RENP00797 406 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 IGHV4-39P01824 125 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 OR4A8P0C604 315 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 PSKH1P11801 424 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 OSMP13725 252 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 ANXA8P13928 327 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 FASP25445 335 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 NOS3P29474 1203 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CRABP1P29762 137 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 PYCR1P32322 319 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 GLRXP35754 106 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 SERPINF1P36955 418 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 WNT5AP41221 380 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 LSM6P62312 80 aaKnown RBP7.36□□□□□ -1.23
UBR1-204ENST00000563239 CDK5Q00535 292 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 SNTB2Q13425 540 aaKnown RBP7.36□□□□□ -1.23
UBR1-204ENST00000563239 DAG1Q14118 895 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CRMP1Q14194 572 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 EFNB3Q15768 340 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 MEP1BQ16820 701 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CCDC92Q53HC0 331 aaPredicted RBP7.36□□□□□ -1.23
UBR1-204ENST00000563239 Q5PR19 223 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 JAZF1Q86VZ6 243 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 TGIF2LYQ8IUE0 185 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 OR2T33Q8NG76 320 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 OR5K1Q8NHB7 308 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 PYDC1Q8WXC3 89 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 DOK1Q99704 481 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 KCNS3Q9BQ31 491 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 WACQ9BTA9 647 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 HCAR1Q9BXC0 346 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CACNG6Q9BXT2 260 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 PLK3Q9H4B4 646 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CXorf56Q9H5V9 222 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 CCNB1IP1Q9NPC3 277 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 FAIMQ9NVQ4 179 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 MRPL22Q9NWU5 206 aaKnown RBP7.36□□□□□ -1.23
UBR1-204ENST00000563239 GDF2Q9UK05 429 aaPredicted RBP7.36□□□□□ -1.23
UBR1-204ENST00000563239 BAIAP2Q9UQB8 552 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 LHFPL6Q9Y693 200 aa7.36□□□□□ -1.23
UBR1-204ENST00000563239 F8P00451 2351 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 IQCMA0A1B0GVH7 501 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 OR6C6A6NF89 314 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 B9A039 149 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 H7C417 338 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 RER1O15258 196 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ICMTO60725 284 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 MITFO75030 526 aaPredicted RBP7.35□□□□□ -1.23
UBR1-204ENST00000563239 GYPBP06028 91 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 CLUP10909 449 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 STOMP27105 288 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 PCSK6P29122 969 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 EPHA2P29317 976 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 GRK5P34947 590 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 GGT2P36268 569 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 SLC25A1P53007 311 aa7.35□□□□□ -1.23
UBR1-204ENST00000563239 ATP5J2P56134 94 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms