RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SLC39A7Q92504 469 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 SLC25A44Q96H78 314 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-203ENST00000563226 OXGR1Q96P68 337 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 P4HTMQ9NXG6 502 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 KLHL9Q9P2J3 617 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 EMC9Q9Y3B6 208 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 KIAA1549Q9HCM3 1950 aa17.03■□□□□ 0.32
SMPD3-203ENST00000563226 IGHG1P01857 330 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 RAF1P04049 648 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 CD3GP09693 182 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 EIF1AXP47813 144 aaKnown RBP17.02■□□□□ 0.32
SMPD3-203ENST00000563226 AGFG1P52594 562 aaKnown RBP17.02■□□□□ 0.32
SMPD3-203ENST00000563226 MTFR2Q6P444 385 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 PRSS45Q7RTY3 260 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 TMPRSS12Q86WS5 348 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 ESX1Q8N693 406 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 YIPF5Q969M3 257 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 R4GMQ9 66 aa17.02■□□□□ 0.32
SMPD3-203ENST00000563226 TTC28Q96AY4 2481 aa17.02■□□□□ 0.31
SMPD3-203ENST00000563226 IGHV3-15A0A0B4J1V0 119 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 FAM240BA0A1B0GVZ2 78 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 A0A1W2PPL8 197 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 HRGP04196 525 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF43P17038 809 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 CDAP32320 146 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 SLC35A1P78382 337 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 GPR176Q14439 515 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 THEM4Q5T1C6 240 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 SERPINA12Q8IW75 414 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 DUSP18Q8NEJ0 188 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 UPRTQ96BW1 309 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 EDEM2Q9BV94 578 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 EMC7Q9NPA0 242 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 G6PC2Q9NQR9 355 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 AHCTF1Q8WYP5 2266 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 ANXA2P2A6NMY6 339 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 ANXA2P07355 339 aaKnown RBP17.01■□□□□ 0.31
SMPD3-203ENST00000563226 LAP3P28838 519 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 DDOSTP39656 456 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 RPS15P62841 145 aaKnown RBP17.01■□□□□ 0.31
SMPD3-203ENST00000563226 PLA2G7Q13093 441 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 SLC36A2Q495M3 483 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF544Q6NX49 715 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 DHRS13Q6UX07 377 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 OR10S1Q8NGN2 331 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 GCDHQ92947 438 aaPredicted RBP17.01■□□□□ 0.31
SMPD3-203ENST00000563226 TMEM41AQ96HV5 264 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 CENPMQ9NSP4 180 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 NPAP1Q9NZP6 1156 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 CAMK2AQ9UQM7 478 aa17.01■□□□□ 0.31
SMPD3-203ENST00000563226 MRPS18BQ9Y676 258 aaKnown RBP17.01■□□□□ 0.31
SMPD3-203ENST00000563226 PMS2P2O95744 297 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 MT-CO3P00414 261 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 F10P00742 488 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 ICAM2P13598 275 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 NR4A2P43354 598 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 MMP15P51511 669 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 RSBN1Q5VWQ0 802 aaPredicted RBP17■□□□□ 0.31
SMPD3-203ENST00000563226 H3F3CQ6NXT2 135 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 PLET1Q6UQ28 207 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF227Q86WZ6 799 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 OR10H5Q8NGA6 315 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 OR6X1Q8NH79 312 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 RNF133Q8WVZ7 376 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 ASB5Q8WWX0 329 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 NKX3-1Q99801 234 aaPredicted RBP17■□□□□ 0.31
SMPD3-203ENST00000563226 AUNIPQ9H7T9 357 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 CYB5R1Q9UHQ9 305 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 CCNKO75909 580 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 FKBP2P26885 142 aaKnown RBP17■□□□□ 0.31
SMPD3-203ENST00000563226 H3F3AP84243 136 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 ACER2Q5QJU3 275 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 LRFN4Q6PJG9 635 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 SLC25A47Q6Q0C1 308 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 KRT74Q7RTS7 529 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 PSMF1Q92530 271 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 SGCZQ96LD1 299 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 CMTM3Q96MX0 182 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 UCN2Q96RP3 112 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 ABCG5Q9H222 651 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 SEC61A2Q9H9S3 476 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 OR52A1Q9UKL2 312 aa17■□□□□ 0.31
SMPD3-203ENST00000563226 CBR3O75828 277 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 SERPINA7P05543 415 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 H2BFMP0C1H6 154 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 CSRP1P21291 193 aaKnown RBP16.99■□□□□ 0.31
SMPD3-203ENST00000563226 BTCP35070 178 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 CLDN17P56750 224 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 TOMM20Q15388 145 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 CFAP77Q6ZQR2 320 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 BEST3Q8N1M1 668 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 SYNPRQ8TBG9 265 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 DHDHQ9UQ10 334 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 LHFPL6Q9Y693 200 aa16.99■□□□□ 0.31
SMPD3-203ENST00000563226 TMEM269A0A1B0GVZ9 245 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 A8MV72 311 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-203ENST00000563226 P04436 131 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 ZNF806P0C7X5 589 aa16.98■□□□□ 0.31
SMPD3-203ENST00000563226 CALCBP10092 127 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms