RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 MPDZO75970 2070 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 A0A0D9SG52 128 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 LOC390937A0A1W2PQ73 354 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 A6NIZ1 184 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 TMEM200CA6NKL6 621 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 PLPP3O14495 311 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 SRSF10O75494 262 aaKnown RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 NUDT14O95848 222 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 CD8AP01732 235 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 FGF2P09038 288 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 FBXO45P0C2W1 286 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 OR4E1P0C645 316 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 UBBP0CG47 229 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 UBCP0CG48 685 aaKnown RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 RAB6AP20340 208 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 RAP1BP61224 184 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 RAP1AP62834 184 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 UBA52P62987 128 aaKnown RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 GLO1Q04760 184 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 PLCXD2Q0VAA5 305 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 ZP4Q12836 540 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 TMEM244Q5VVB8 128 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 C1orf140Q5VVS0 124 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 C1QL3Q5VWW1 255 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 DNM1P34Q6PK57 102 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 ZNF704Q6ZNC4 412 aaPredicted RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 PRR22Q8IZ63 422 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 CARFQ8N187 725 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 NKAIN3Q8N8D7 197 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 LHFPL5Q8TAF8 219 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 ATOH1Q92858 354 aaPredicted RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 SLC25A44Q96H78 314 aaPredicted RBP11.77□□□□□ -0.53
USB1-207ENST00000563149 TGM7Q96PF1 710 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 GAL3ST4Q96RP7 486 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 EDEM2Q9BV94 578 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 SHARPINQ9H0F6 387 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 LRP12Q9Y561 859 aa11.77□□□□□ -0.53
USB1-207ENST00000563149 H3BMH7 237 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 AHSA1O95433 338 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 MGMTP16455 207 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 POU3F2P20265 443 aaPredicted RBP11.76□□□□□ -0.53
USB1-207ENST00000563149 MPGP29372 298 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 DNASE1L1P49184 302 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
USB1-207ENST00000563149 NR0B1P51843 470 aaKnown RBP11.76□□□□□ -0.53
USB1-207ENST00000563149 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
USB1-207ENST00000563149 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 GLYATL3Q5SZD4 288 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 PHF19Q5T6S3 580 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 DCAF12L2Q5VW00 463 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 ZNF660Q6AZW8 331 aaPredicted RBP11.76□□□□□ -0.53
USB1-207ENST00000563149 RAB12Q6IQ22 244 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 TTLL10Q6ZVT0 673 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 C9orf40Q8IXQ3 194 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 OR8S1Q8NH09 359 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 GPR119Q8TDV5 335 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 TSLPQ969D9 159 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 CHST6Q9GZX3 395 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 POFUT1Q9H488 388 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 TAS2R4Q9NYW5 299 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 GTF2A1LQ9UNN4 478 aa11.76□□□□□ -0.53
USB1-207ENST00000563149 MEIS3P1A6NDR6 274 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 NPIPB13A6NJU9 1138 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 NPIPB4C9JG80 1138 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 H3BSH0 61 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 TPD52L2O43399 206 aaKnown RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 FADS1O60427 444 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 CYB5AP00167 134 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 PLGP00747 810 aaPredicted RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 ZNF735P0CB33 412 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 NME1P15531 152 aaKnown RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 CTLA4P16410 223 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 ZNF823P16415 610 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 MPZP25189 248 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 PTGS2P35354 604 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 GFERP55789 205 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 SLC26A5P58743 744 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
USB1-207ENST00000563149 MEF2DQ14814 521 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 RAB30Q15771 203 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 POMZP3Q6PJE2 187 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 ZNF627Q7L945 461 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 MISPQ8IVT2 679 aa11.75□□□□□ -0.53
USB1-207ENST00000563149 BVESQ8NE79 360 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms