RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SPATA46Q5T0L3 261 aa8.78□□□□□ -1
CLK3-205ENST00000561673 GLYATQ6IB77 296 aa8.78□□□□□ -1
CLK3-205ENST00000561673 ZNF774Q6NX45 483 aa8.78□□□□□ -1
CLK3-205ENST00000561673 RRM2BQ7LG56 351 aa8.78□□□□□ -1
CLK3-205ENST00000561673 FAM122BQ7Z309 247 aa8.78□□□□□ -1
CLK3-205ENST00000561673 FAM156AQ8NDB6 213 aa8.78□□□□□ -1
CLK3-205ENST00000561673 MARS2Q96GW9 593 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 FAM46AQ96IP4 442 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 C7orf34Q96L11 122 aa8.78□□□□□ -1
CLK3-205ENST00000561673 ZNF416Q9BWM5 594 aa8.78□□□□□ -1
CLK3-205ENST00000561673 FAM107BQ9H098 131 aa8.78□□□□□ -1
CLK3-205ENST00000561673 RACGAP1Q9H0H5 632 aa8.78□□□□□ -1
CLK3-205ENST00000561673 ANKRD19PQ9H560 264 aa8.78□□□□□ -1
CLK3-205ENST00000561673 NARFLQ9H6Q4 476 aa8.78□□□□□ -1
CLK3-205ENST00000561673 SPAG4Q9NPE6 437 aa8.78□□□□□ -1
CLK3-205ENST00000561673 DCAF13Q9NV06 445 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 NKIRAS2Q9NYR9 191 aa8.78□□□□□ -1
CLK3-205ENST00000561673 EIF3KQ9UBQ5 218 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 RPS6KA6Q9UK32 745 aa8.78□□□□□ -1
CLK3-205ENST00000561673 MALRD1Q5VYJ5 2156 aa8.78□□□□□ -1
CLK3-205ENST00000561673 PRSS37A4D1T9 235 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 B4DSR2 109 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 SNX3O60493 162 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 NGFP01138 241 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 H1F0P07305 194 aaKnown RBP8.77□□□□□ -1.01
CLK3-205ENST00000561673 RHCEP18577 417 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 MSR1P21757 451 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 PRDX6P30041 224 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 MPV17P39210 176 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 OMPP47874 163 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 GLO1Q04760 184 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 SEC23BQ15437 767 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 ZNF718Q3SXZ3 478 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 MESTQ5EB52 335 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 MBNL2Q5VZF2 373 aaKnown RBP8.77□□□□□ -1.01
CLK3-205ENST00000561673 UGT2A3Q6UWM9 527 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 THSD4Q6ZMP0 1018 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 SYT9Q86SS6 491 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 ALDH16A1Q8IZ83 802 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 RNF148Q8N7C7 305 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 FAM86B1Q8N7N1 296 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 OR52J3Q8NH60 311 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 CLDND2Q8NHS1 167 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 SLC25A40Q8TBP6 338 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 KLF14Q8TD94 323 aaPredicted RBP8.77□□□□□ -1.01
CLK3-205ENST00000561673 SNX33Q8WV41 574 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 Q96M85 177 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 OR2J1Q9GZK6 312 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 POLE4Q9NR33 117 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 TREM2Q9NZC2 230 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 ADA2Q9NZK5 511 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 TMEFF2Q9UIK5 374 aaPredicted RBP8.77□□□□□ -1.01
CLK3-205ENST00000561673 TMEM5Q9Y2B1 443 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 FAM32AQ9Y421 112 aaKnown RBP8.77□□□□□ -1.01
CLK3-205ENST00000561673 FBN3Q75N90 2809 aa8.77□□□□□ -1.01
CLK3-205ENST00000561673 IGHV1-69-2A0A0G2JMI3 117 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 TEX13CA0A0J9YWL9 993 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 TRBV4-1A0A0J9YWV2 114 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 C12orf71A8MTZ7 269 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 FAM157AC9JC47 383 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 XKRYO14609 159 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 IMPA2O14732 288 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 SPRY3O43610 288 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 AHCYL1O43865 530 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 ICMTO60725 284 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 DIRAS1O95057 198 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 MT-ND5P03915 603 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 GAAP10253 952 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 CTLA4P16410 223 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 GCH1P30793 250 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 CRYBB2P43320 205 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 LIMS1P48059 325 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 ZNF81P51508 661 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 MMP15P51511 669 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 DVL1P1P54792 670 aaPredicted RBP8.76□□□□□ -1.01
CLK3-205ENST00000561673 FXYD6P3P58550 94 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 LMO4P61968 165 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 PPP1CBP62140 327 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
CLK3-205ENST00000561673 TSTQ16762 297 aaKnown RBP8.76□□□□□ -1.01
CLK3-205ENST00000561673 FGD3Q5JSP0 725 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 UNQ6126/PRO20091Q6UXV3 157 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 RFPL4BQ6ZWI9 263 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 CPLX4Q7Z7G2 160 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 C1orf174Q8IYL3 243 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 ABHD4Q8TB40 342 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 IPCEF1Q8WWN9 437 aaPredicted RBP8.76□□□□□ -1.01
CLK3-205ENST00000561673 RASD2Q96D21 266 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 C4orf45Q96LM5 186 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 ZNF570Q96NI8 536 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 GPA33Q99795 319 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 FUZQ9BT04 418 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 GORASP2Q9H8Y8 452 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 EMC7Q9NPA0 242 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 NRIP3Q9NQ35 241 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 DECR2Q9NUI1 292 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 IL20RAQ9UHF4 553 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 SAMD4AQ9UPU9 718 aaKnown RBP8.76□□□□□ -1.01
CLK3-205ENST00000561673 SIGLEC7Q9Y286 467 aa8.76□□□□□ -1.01
CLK3-205ENST00000561673 TPD52L2O43399 206 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms