RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 SFTPDP35247 375 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 UGT1A5P35504 534 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CD79BP40259 229 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TNFSF10P50591 281 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CDK9P50750 372 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PLP1P60201 277 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 HERV-K104P63124 156 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 HERVK_113P63132 956 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ERVK-25P63136 954 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF33BQ06732 778 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 RBBP4Q09028 425 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CNTN1Q12860 1018 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PEX6Q13608 980 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TMED2Q15363 201 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CHI3L2Q15782 390 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 FAM189A2Q15884 450 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CHRFAM7AQ494W8 412 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 GLYR1Q49A26 553 aaPredicted RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 AKIRIN2Q53H80 203 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SFT2D3Q587I9 215 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PIGGQ5H8A4 983 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TEX30Q5JUR7 227 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 FFAR4Q5NUL3 377 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CAPN13Q6MZZ7 669 aaPredicted RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 RWDD4Q6NW29 188 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 LRRC31Q6UY01 552 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF562Q6V9R5 426 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 HSDL2Q6YN16 418 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC121Q6ZUS5 278 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 HDDC2Q7Z4H3 204 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PARGQ86W56 976 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 UMODL1-AS1Q8N2C9 162 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF843Q8N446 348 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 NPWQ8N729 165 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 BMPERQ8N8U9 685 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC71LQ8N9Z2 235 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM178AQ8NBL3 297 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 OR10Q1Q8NGQ4 319 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 OR2L8Q8NGY9 312 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ACTL9Q8TC94 416 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SAP25Q8TEE9 199 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SETD7Q8WTS6 366 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF524Q96C55 264 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 RAB39BQ96DA2 213 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 CSPG4P5Q96PW8 444 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PRRT1Q99946 306 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TTYH2Q9BSA4 534 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SNRNP25Q9BV90 132 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ERVK-6Q9BXR3 956 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 TRIM15Q9C019 465 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 SLC39A8Q9C0K1 460 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 OR51B5Q9H339 312 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PIGUQ9H490 435 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ACTL8Q9H568 366 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 WDR55Q9H6Y2 383 aaPredicted RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PDFQ9HBH1 243 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 RAB18Q9NP72 206 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 PARVAQ9NVD7 372 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 GPATCH2LQ9NWQ4 482 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 STMN3Q9NZ72 180 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 MYEF2Q9P2K5 600 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF346Q9UL40 294 aaKnown RBP3.5□□□□□ -1.85
LRRC28-222ENST00000561431 EMCNQ9ULC0 261 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 GSTK1Q9Y2Q3 226 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 THADAQ6YHU6 1953 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 DOCK4Q8N1I0 1966 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
LRRC28-222ENST00000561431 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 COL5A1P20908 1838 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 USP24Q9UPU5 2620 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ADAMTS9Q9P2N4 1935 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PPIAL4CA0A0B4J2A2 164 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 KBTBD11-OT1A0A1B0GTJ5 212 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 GNG14A0A1W2PPG7 69 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 A0A1W2PPK0 400 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CCT8L1PA6NM43 557 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 C2orf74A8MZ97 194 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PRSS46E5RG02 174 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TRAFD1O14545 582 aaPredicted RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CCSO14618 274 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ARPC1BO15143 372 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CLOCKO15516 846 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 AQP9O43315 295 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 TPST2O60704 377 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ATP6AP2O75787 350 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 EML2O95834 649 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF883P0CG24 379 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 UBCP0CG48 685 aaKnown RBP3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PRSS56P0CW18 603 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PPIAL4GP0DN37 164 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 UGT1A4P22310 534 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CD82P27701 267 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 PSMB5P28074 263 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 MIPP30301 263 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 SERPINB1P30740 379 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 UGT1A3P35503 534 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CFHR2P36980 270 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 CEACAM3P40198 252 aa3.49□□□□□ -1.85
LRRC28-222ENST00000561431 ID1P41134 155 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms