RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 THTPAQ9BU02 230 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 OR51B6Q9H340 312 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 CHODLQ9H9P2 273 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 TAS2R1Q9NYW7 299 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 SIGLEC7Q9Y286 467 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 TIMM10BQ9Y5J6 103 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ANK2Q01484 3957 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 TRBV4-1A0A0J9YWV2 114 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 PRSS37A4D1T9 235 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 IMPA2O14732 288 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 ATP5HO75947 161 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 DIRAS1O95057 198 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 HPXP02790 462 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 SEMG1P04279 462 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 TACSTD2P09758 323 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 NOS3P29474 1203 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 SLC6A6P31641 620 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 SLC25A47Q6Q0C1 308 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF540Q8NDQ6 660 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF519Q8TB69 540 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 UBASH3BQ8TF42 649 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 GPX7Q96SL4 187 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-204ENST00000561065 BCL2L14Q9BZR8 327 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 REV1Q9UBZ9 1251 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
LMX1B-204ENST00000561065 CDC42EP2O14613 210 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 LMX1BO60663 402 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 SNAP29O95721 258 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 CLPTM1O96005 669 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 CST2P09228 141 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 T-ENOLP0DO92 83 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF26P17031 533 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-204ENST00000561065 MSR1P21757 451 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 FPR3P25089 353 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 CRABP1P29762 137 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 RFX4Q33E94 735 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 TMEM255AQ5JRV8 349 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 PGM2L1Q6PCE3 622 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 CPEB3Q8NE35 698 aaKnown RBP13.67□□□□□ -0.22
LMX1B-204ENST00000561065 C11orf40Q8WZ69 217 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 REEP1Q9H902 201 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 NRIP3Q9NQ35 241 aa13.67□□□□□ -0.22
LMX1B-204ENST00000561065 STAB1Q9NY15 2570 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 IGLV3-9A0A075B6K5 115 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 LOC100289279A0A1B0GTE1 492 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 A0A1W2PPL8 197 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 GNGT2O14610 69 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
LMX1B-204ENST00000561065 RENP00797 406 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 RAP2AP10114 183 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 NAT2P11245 290 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF32P17041 273 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 APEX1P27695 318 aaKnown RBP13.66□□□□□ -0.22
LMX1B-204ENST00000561065 LIMS1P48059 325 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 TSPAN31Q12999 210 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 PABPC1L2AQ5JQF8 200 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 FAM166AQ6J272 317 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 RGS7BPQ6MZT1 257 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-204ENST00000561065 C1orf94Q6P1W5 598 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 GTF3AQ92664 365 aaKnown RBP13.66□□□□□ -0.22
LMX1B-204ENST00000561065 YIPF5Q969M3 257 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 Q96M85 177 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 DUSP13Q9UII6 198 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 IER3IP1Q9Y5U9 82 aa13.66□□□□□ -0.22
LMX1B-204ENST00000561065 A0A1W2PPW3 197 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 H7C1C5 153 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 CCNB2O95067 398 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 MT-ND5P03915 603 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF250P15622 560 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 GSTM3P21266 225 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 WNT5AP41221 380 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 GDI2P50395 445 aaKnown RBP13.65□□□□□ -0.22
LMX1B-204ENST00000561065 LCN6P62502 163 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 SCRN3Q0VDG4 424 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 KRR1Q13601 381 aaKnown RBP13.65□□□□□ -0.22
LMX1B-204ENST00000561065 SEC23BQ15437 767 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 OR2T5Q6IEZ7 315 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 FOXL2NBQ6ZUU3 175 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ZER1Q7Z7L7 766 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 GLB1L2Q8IW92 636 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF101Q8IZC7 436 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 OR2T29Q8NH02 315 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 FANK1Q8TC84 345 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ERMAPQ96PL5 475 aaPredicted RBP13.65□□□□□ -0.22
LMX1B-204ENST00000561065 FUZQ9BT04 418 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 IFT27Q9BW83 186 aa13.65□□□□□ -0.22
LMX1B-204ENST00000561065 ELOVL3Q9HB03 270 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms