RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 LILRB3O75022 631 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 AK1P00568 194 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 CRHP06850 196 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 SRSF5Q13243 272 aaKnown RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 ETFBKMTQ8IXQ9 262 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 ZSCAN4Q8NAM6 433 aaPredicted RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 MITD1Q8WV92 249 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 CMBLQ96DG6 245 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 ZNF285Q96NJ3 590 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 DCBLD2Q96PD2 775 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 MOGAT1Q96PD6 335 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 SYT4Q9H2B2 425 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 ELOVL3Q9HB03 270 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 MYOZ1Q9NP98 299 aaPredicted RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 SMCO4Q9NRQ5 59 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 TAS2R4Q9NYW5 299 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 RNASEK-C17orf49H0YIS7 233 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 RHOP08100 348 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 HTR2CP28335 458 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 CD80P33681 288 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 LSSP48449 732 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 ACER2Q5QJU3 275 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 JAGN1Q8N5M9 183 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 MRGPRFQ96AM1 343 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 RBM18Q96H35 190 aaKnown RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 ELF4Q99607 663 aaPredicted RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 OR51M1Q9H341 326 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPM1-228ENST00000560975 PRR13Q9NZ81 148 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 MRPS18BQ9Y676 258 aaKnown RBP14.88□□□□□ -0.03
TPM1-228ENST00000560975 NOTCH4Q99466 2003 aa14.88□□□□□ -0.03
TPM1-228ENST00000560975 A0A087WUJ7 227 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 TEX13DA0A0J9YY54 714 aaPredicted RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 C9JQL5 133 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 UBE2CO00762 179 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 YKT6O15498 198 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 CTSVO60911 334 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 RDH16O75452 317 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 HLA-DQA2P01906 255 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ALOX5APP20292 161 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 GRK6P43250 576 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 KLHL26Q53HC5 615 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 LILRA6Q6PI73 481 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 OR51A2Q8NGJ7 313 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 HIST1H2BAQ96A08 127 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ISOC2Q96AB3 205 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 RPS10P5Q9NQ39 176 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 DZANK1Q9NVP4 752 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 PRKNO60260 465 aaPredicted RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 CD14P08571 375 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ZNF14P17017 642 aaPredicted RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 PPICP45877 212 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ID4P47928 161 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 SPOCK1Q08629 439 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 RASGEF1BQ0VAM2 473 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ALG10Q5BKT4 473 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 EXOSC6Q5RKV6 272 aaKnown RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 IL34Q6ZMJ4 242 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 RELTQ969Z4 430 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 ZC3H10Q96K80 434 aaKnown RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 RNF126Q9BV68 326 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 LPAR3Q9UBY5 353 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 NUP210LQ5VU65 1888 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 H0YIZ8 118 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 STK17BO94768 372 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 NQO2P16083 231 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 NME2P22392 152 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 WASP42768 502 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 CCR4P51679 360 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 PRPS1P60891 318 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 RPS15AP62244 130 aaKnown RBP14.87□□□□□ -0.03
TPM1-228ENST00000560975 PSG6Q00889 435 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 MGAT2Q10469 447 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 MEP1BQ16820 701 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 LHX8Q68G74 356 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 EXD3Q8N9H8 876 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 CHST4Q8NCG5 386 aa14.87□□□□□ -0.03
TPM1-228ENST00000560975 EFCAB7A8K855 629 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 GPR75O95800 540 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 CSTAP01040 98 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 SERPINA5P05154 406 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 S100PP25815 95 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 CD1CP29017 333 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 DEFB103AP81534 67 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 ALG11Q2TAA5 492 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 FAM76BQ5HYJ3 339 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 ZNF550Q7Z398 422 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 AKR1E2Q96JD6 320 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.86□□□□□ -0.03
TPM1-228ENST00000560975 GRHPRQ9UBQ7 328 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 DHDHQ9UQ10 334 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 A0A087WV62 115 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 A0A0A6YYC8 382 aaPredicted RBP14.86□□□□□ -0.03
TPM1-228ENST00000560975 I3L1I5 382 aaPredicted RBP14.86□□□□□ -0.03
TPM1-228ENST00000560975 MED6O75586 246 aa14.86□□□□□ -0.03
TPM1-228ENST00000560975 PNPP00491 289 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms