RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 C10orf111Q8N326 155 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 AKR7LQ8NHP1 331 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 ASB10Q8WXI3 467 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 NMD3Q96D46 503 aaKnown RBP15.54■□□□□ 0.08
TPM1-226ENST00000560959 C4orf45Q96LM5 186 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 RBM4BQ9BQ04 359 aaKnown RBP15.54■□□□□ 0.08
TPM1-226ENST00000560959 SSBP3Q9BWW4 388 aaPredicted RBP15.54■□□□□ 0.08
TPM1-226ENST00000560959 CORO2BQ9UQ03 480 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 PPP1R3CQ9UQK1 317 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 UGT2A1Q9Y4X1 527 aa15.54■□□□□ 0.08
TPM1-226ENST00000560959 SOX21Q9Y651 276 aaPredicted RBP15.54■□□□□ 0.08
TPM1-226ENST00000560959 IGHV2-70DA0A0C4DH43 119 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 KIR2DS1A0A191URI9 304 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 NPIPB13A6NJU9 1138 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 CEACAM18A8MTB9 384 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 NPIPB4C9JG80 1138 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 MCIDASD6RGH6 385 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 BLOC1S5-TXNDC5H3BN57 136 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 TMEM178BH3BS89 294 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 TIMM8AO60220 97 aaPredicted RBP15.53■□□□□ 0.08
TPM1-226ENST00000560959 THY1P04216 161 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 KITP10721 976 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 CDAP32320 146 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 PDCD1Q15116 288 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 DEFB112Q30KQ8 113 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 KRT71Q3SY84 523 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 ENTPD8Q5MY95 495 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 HIST2H2BDQ6DRA6 164 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 ASPHD2Q6ICH7 369 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 Q6YL49 198 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 NANOGNBQ7Z5D8 188 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 JAZF1Q86VZ6 243 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 POU5F2Q8N7G0 328 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 OR6T1Q8NGN1 323 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 OR10S1Q8NGN2 331 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 VANGL1Q8TAA9 524 aaPredicted RBP15.53■□□□□ 0.08
TPM1-226ENST00000560959 ADAMTS16Q8TE57 1224 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 ZDHHC16Q969W1 377 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 OR2H1Q9GZK4 316 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 WNT5BQ9H1J7 359 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.53■□□□□ 0.08
TPM1-226ENST00000560959 MIOXQ9UGB7 285 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 TIMM10BQ9Y5J6 103 aa15.53■□□□□ 0.08
TPM1-226ENST00000560959 IGHV3OR16-10A0A075B7F0 116 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 TRAV40A0A0B4J280 105 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 TRAPPC13A5PLN9 417 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 IGF2P01344 180 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 CST2P09228 141 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 UMPSP11172 480 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 SELEP16581 610 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 GSTM3P21266 225 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 KITLGP21583 273 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 PCBP3P57721 371 aaKnown RBP15.52■□□□□ 0.08
TPM1-226ENST00000560959 PCBD1P61457 104 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 RELBQ01201 579 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 RPL18Q07020 188 aaKnown RBP15.52■□□□□ 0.08
TPM1-226ENST00000560959 HLXQ14774 488 aaPredicted RBP15.52■□□□□ 0.08
TPM1-226ENST00000560959 SGCAQ16586 387 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 DUSP7Q16829 419 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 TNFAIP8L3Q5GJ75 292 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 ARMC4Q5T2S8 1044 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 FIP1L1Q6UN15 594 aaKnown RBP15.52■□□□□ 0.08
TPM1-226ENST00000560959 NPEPL1Q8NDH3 523 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 OR2Z1Q8NG97 314 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 UBE2FQ969M7 185 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 PLEKHA8Q96JA3 519 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 FAM71F1Q96KD3 344 aaPredicted RBP15.52■□□□□ 0.08
TPM1-226ENST00000560959 MAGEB18Q96M61 343 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 SLC30A2Q9BRI3 323 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 PCDHAC1Q9H158 963 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 KCNK9Q9NPC2 374 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 TBCCD1Q9NVR7 557 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 SLAMF8Q9P0V8 285 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 POMT1Q9Y6A1 747 aa15.52■□□□□ 0.08
TPM1-226ENST00000560959 TRBV5-3A0A0A0MS03 114 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 MDFIC2A0A1B0GVS7 189 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 CPSF4LA6NMK7 179 aaKnown RBP15.51■□□□□ 0.07
TPM1-226ENST00000560959 EVPLLA8MZ36 301 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 M0R3H8 397 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 SLC2A10O95528 541 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 F13BP05160 661 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 TSPAN19P0C672 248 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 AQP1P29972 269 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 VSNL1P62760 191 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 GNB2P62879 340 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 ERVK-25P63136 954 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 TAF11Q15544 211 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 NPTX1Q15818 432 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 TAF9Q16594 264 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 SLC25A47Q6Q0C1 308 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 Q6ZR03 302 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 SYT9Q86SS6 491 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 SMYD1Q8NB12 490 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 AENQ8WTP8 325 aaKnown RBP15.51■□□□□ 0.07
TPM1-226ENST00000560959 OR52B2Q96RD2 323 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 PAIP2Q9BPZ3 127 aaKnown RBP15.51■□□□□ 0.07
TPM1-226ENST00000560959 WACQ9BTA9 647 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 TMEM165Q9HC07 324 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 INIPQ9NRY2 104 aa15.51■□□□□ 0.07
TPM1-226ENST00000560959 VAPAQ9P0L0 249 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms