RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SIRPAP78324 504 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ROM1Q03395 351 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 AQP6Q13520 282 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 EIF2B1Q14232 305 aaKnown RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ACSF3Q4G176 576 aaPredicted RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 TP53I3Q53FA7 332 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 TSPO2Q5TGU0 170 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 LIPKQ5VXJ0 399 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FOXB2Q5VYV0 432 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF544Q6NX49 715 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 RPL22L1Q6P5R6 122 aaKnown RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 SLC16A12Q6ZSM3 486 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FAM214BQ7L5A3 538 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 SSX6Q7RTT6 188 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FGD2Q7Z6J4 655 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 SYT9Q86SS6 491 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ATCAYQ86WG3 371 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 PHC2Q8IXK0 858 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF100Q8IYN0 542 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 CISD2Q8N5K1 135 aaKnown RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 YIPF7Q8N8F6 280 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 GJC3Q8NFK1 279 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 OR2AJ1Q8NGZ0 328 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 OR52N5Q8NH56 324 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 MBD3L2Q8NHZ7 208 aaPredicted RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FAM57AQ8TBR7 257 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 SMAP2Q8WU79 429 aaPredicted RBP7.6□□□□□ -1.19
TRAF3-209ENST00000560463 C11orf40Q8WZ69 217 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ISOC1Q96CN7 298 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 FOXN4Q96NZ1 517 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 OR8B4Q96RC9 309 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 COQ7Q99807 217 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ABHD6Q9BV23 337 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 MROQ9BYG7 248 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 C1orf198Q9H425 327 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 NIPAL2Q9H841 368 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 SIAEQ9HAT2 523 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 CRLF2Q9HC73 371 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 UPB1Q9UBR1 384 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 GNG8Q9UK08 70 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 ZMIZ1Q9ULJ6 1067 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
TRAF3-209ENST00000560463 COL6A6A6NMZ7 2263 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ARPC4-TTLL3A0A0A6YYG9 625 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 TRIM64BA6NI03 449 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 H3BMQ9 156 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 PRRG2O14669 202 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SLC22A1O15245 554 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 OGG1O15527 345 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 AIREO43918 545 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 GPRIN2O60269 458 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 WISP2O76076 250 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 MPZL1O95297 269 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 FARS2O95363 451 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 TPOP07202 933 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 CST2P09228 141 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ABOP16442 354 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 CELP19835 753 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 GALP22466 123 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 DCTDP32321 178 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 TIMP3P35625 211 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 RPS27P42677 84 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 RIDAP52758 137 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SH3BGRP55822 239 aaPredicted RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 PCBD1P61457 104 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ROR2Q01974 943 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 RBPJQ06330 500 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ESPL1Q14674 2120 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 GUSBP1Q15486 140 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SSX1Q16384 188 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SGCAQ16586 387 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 MEP1BQ16820 701 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 CEACAM16Q2WEN9 425 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF585AQ6P3V2 769 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF627Q7L945 461 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 DCXRQ7Z4W1 244 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 KRT77Q7Z794 578 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 MS4A15Q8N5U1 240 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 RFLNBQ8N5W9 214 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 OR5M9Q8NGP3 310 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 OR6K3Q8NGY3 331 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 ST7LQ8TDW4 575 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 RNF133Q8WVZ7 376 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 NABP1Q96AH0 204 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 C12orf43Q96C57 262 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SNRNP40Q96DI7 357 aaKnown RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 PELI1Q96FA3 418 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 FOXB1Q99853 325 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 KCNN2Q9H2S1 579 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 TP63Q9H3D4 680 aaPredicted RBP7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SLC7A10Q9NS82 523 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 LUZP4Q9P127 313 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 MALT1Q9UDY8 824 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 IKZF2Q9UKS7 526 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 STUB1Q9UNE7 303 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 SSR3Q9UNL2 185 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 POLR1DQ9Y2S0 133 aa7.59□□□□□ -1.19
TRAF3-209ENST00000560463 LHFPL6Q9Y693 200 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms