RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KCNE4Q8WWG9 221 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 OR2M2Q96R28 347 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 ATF6BQ99941 703 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 TTYH2Q9BSA4 534 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 NAA11Q9BSU3 229 aaPredicted RBP9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 OR2B2Q9GZK3 357 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 WDR12Q9GZL7 423 aaKnown RBP9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 C14orf119Q9NWQ9 140 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 ASH2LQ9UBL3 628 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 POLHQ9Y253 713 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF281Q9Y2X9 895 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 EMC9Q9Y3B6 208 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 NPIPB13A6NJU9 1138 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 GJE1A6NN92 205 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 NPIPB4C9JG80 1138 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 FZD7O75084 574 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 OCM2P0CE71 109 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 CD46P15529 392 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 CSNK1A1P48729 337 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 LHX2P50458 406 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 MS4A15Q8N5U1 240 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 S100ZQ8WXG8 99 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 MRPL48Q96GC5 212 aaKnown RBP9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 ALKBH3Q96Q83 286 aaPredicted RBP9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 GLTPQ9NZD2 209 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 B4GALT7Q9UBV7 327 aa9.64□□□□□ -0.87
SNRPA1-211ENST00000560433 PROB1E7EW31 1015 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 KLRC4-KLRK1H3BQV0 150 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SULT1C4O75897 302 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC2A1P11166 492 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 AGFG1P52594 562 aaKnown RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CDC20Q12834 499 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CCDC58Q4VC31 144 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM205BPQ63HN1 556 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC25A47Q6Q0C1 308 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF433Q8N7K0 673 aaPredicted RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 DNAAF1Q8NEP3 725 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 OR10S1Q8NGN2 331 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 HAS2Q92819 552 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 COQ7Q99807 217 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 MED18Q9BUE0 208 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 EXO5Q9H790 373 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CMAHPQ9Y471 501 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 FLVCR1Q9Y5Y0 555 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 LHFPL6Q9Y693 200 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 A0A075B6Q4 140 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 OR4C45A6NMZ5 311 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 HPNP05981 417 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 MYL9P24844 172 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 TNFSF10P50591 281 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 RIDAP52758 137 aaKnown RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CLDN18P56856 261 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 HIST3H3Q16695 136 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SPANXN2Q5MJ10 180 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 KCTD18Q6PI47 426 aaPredicted RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 KCTD20Q7Z5Y7 419 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CCDC190Q86UF4 302 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 FNDC9Q8TBE3 224 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SLAMF6Q96DU3 332 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 SLC30A2Q9BRI3 323 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 LDAHQ9H6V9 325 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CRNNQ9UBG3 495 aaPredicted RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 CYB5R1Q9UHQ9 305 aa9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 KLF13Q9Y2Y9 288 aaPredicted RBP9.63□□□□□ -0.87
SNRPA1-211ENST00000560433 IQCMA0A1B0GVH7 501 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 LINC00854A0A1B0GVQ3 168 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF716A6NP11 495 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 LOC110117498-PIK3R3F6TDL0 507 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 AQP8O94778 261 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 MAS1P04201 325 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SRMP19623 302 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 CD40LGP29965 261 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 MTNR1BP49286 362 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 PSMD7P51665 324 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 PRKXP51817 358 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 BLVRAP53004 296 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 CLDN12P56749 244 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 RASGEF1BQ0VAM2 473 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 RTP5Q14D33 572 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 HSD17B12Q53GQ0 312 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 C9orf135Q5VTT2 229 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 FCRLAQ7L513 359 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM123Q8N131 208 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF416Q9BWM5 594 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 TIGARQ9NQ88 270 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 KLHL9Q9P2J3 617 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 GDF2Q9UK05 429 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 A0A0G2JK05 382 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 LOC102725191A0A1B0GVB3 256 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 CENPBD1B2RD01 187 aa9.62□□□□□ -0.87
SNRPA1-211ENST00000560433 PHYHO14832 338 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms