RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 BPIFA2Q96DR5 249 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 ARL5BQ96KC2 179 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 KLHDC3Q9BQ90 382 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 KATNB1Q9BVA0 655 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 PRRG3Q9BZD7 231 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 PLCXD1Q9NUJ7 323 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 PARPBPQ9NWS1 579 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 SCOCQ9UIL1 159 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 BLOC1S6Q9UL45 172 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 PCDHGB5Q9Y5G0 923 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CORINQ9Y5Q5 1042 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 SPIN1Q9Y657 262 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CDH10Q9Y6N8 788 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 IGKV1D-42A0A075B6H8 117 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 A0A0G2JMP0 313 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 A0A0X1KG70 313 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 LYNX1G3V0Z9 82 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 CDC42EP2O14613 210 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 NPIPB7O75200 414 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 PTP4A3O75365 173 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 KRT33AO76009 404 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 TSPAN19P0C672 248 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 LYNX1P0DP58 116 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 GAAP10253 952 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 NPR2P20594 1047 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 PAX7P23759 505 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 CRHBPP24387 322 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 APOBEC1P41238 236 aaKnown RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 POLR2HP52434 150 aaKnown RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 FOXG1P55316 489 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 APOFQ13790 326 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 TOMM34Q15785 309 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 NDUFAF6Q330K2 333 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 ABLIM2Q6H8Q1 611 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 LAIR2Q6ISS4 152 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 SLC27A4Q6P1M0 643 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 TMPPEQ6ZT21 453 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 C1QL2Q7Z5L3 287 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 ABHD12BQ7Z5M8 362 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 ENTHD1Q8IYW4 607 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 CADM2Q8N3J6 435 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 OR4M2Q8NGB6 313 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 OR4F15Q8NGB8 312 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 OR8J1Q8NGP2 316 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 TPK1Q9H3S4 243 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 ZMAT3Q9HA38 289 aaKnown RBP8.01□□□□□ -1.13
SMAD3-215ENST00000560424 OBP2BQ9NPH6 170 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 ESM1Q9NQ30 184 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 TREM2Q9NZC2 230 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 BAIAP2Q9UQB8 552 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 SIGLEC7Q9Y286 467 aa8.01□□□□□ -1.13
SMAD3-215ENST00000560424 IGHV1-18A0A0C4DH31 117 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 VGLL3A8MV65 326 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 H3BN98 237 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 ZNF208O43345 1280 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 WBP4O75554 376 aaKnown RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 MT-ATP6P00846 226 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 ADRA2AP08913 450 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 SMIM18P0DKX4 95 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 IFI30P13284 250 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 MAKP20794 623 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 TACR3P29371 465 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 MPGP29372 298 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 IL5RAQ01344 420 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 QPRTQ15274 297 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 OCLNQ16625 522 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 HIKESHIQ53FT3 197 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 SYT14P1Q58G82 188 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 MEDAGQ5VYS4 303 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 LNX2Q8N448 690 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 PFN4Q8NHR9 129 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 ZNF563Q8TA94 476 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 FAM81AQ8TBF8 368 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 TEX47Q8TBZ9 253 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 APH1BQ8WW43 257 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 C22orf15Q8WYQ4 148 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 SGTBQ96EQ0 304 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 GPX7Q96SL4 187 aaPredicted RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 TEX12Q9BXU0 123 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 MRPS26Q9BYN8 205 aaKnown RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 SLITRK2Q9H156 845 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 DUSP21Q9H596 190 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 MOV10Q9HCE1 1003 aaKnown RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 CCNB1IP1Q9NPC3 277 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8□□□□□ -1.13
SMAD3-215ENST00000560424 C20orf141Q9NUB4 165 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 IMPAD1Q9NX62 359 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 OSGIN1Q9UJX0 560 aa8□□□□□ -1.13
SMAD3-215ENST00000560424 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
SMAD3-215ENST00000560424 A0A087WXM4 84 aa7.99□□□□□ -1.13
SMAD3-215ENST00000560424 UNC119BA6NIH7 251 aa7.99□□□□□ -1.13
SMAD3-215ENST00000560424 ZNF716A6NP11 495 aa7.99□□□□□ -1.13
SMAD3-215ENST00000560424 EFCAB9A8MZ26 197 aa7.99□□□□□ -1.13
SMAD3-215ENST00000560424 SLC1A7O00341 560 aa7.99□□□□□ -1.13
SMAD3-215ENST00000560424 BHLHE40O14503 412 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms