RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 ZNF555Q8NEP9 628 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 IL17RDQ8NFM7 739 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 OR4F15Q8NGB8 312 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 OR52L1Q8NGH7 329 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 GIPC3Q8TF64 312 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 TFAP2CQ92754 450 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
LDLR-211ENST00000560173 SNX18Q96RF0 628 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 FEVQ99581 238 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 NIPSNAP1Q9BPW8 284 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 ADI1Q9BV57 179 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 YTHDF1Q9BYJ9 559 aaKnown RBP8.11□□□□□ -1.11
LDLR-211ENST00000560173 GSX2Q9BZM3 304 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 GRIP2Q9C0E4 1043 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 GABARAPL1Q9H0R8 117 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 CXorf56Q9H5V9 222 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 POLE4Q9NR33 117 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 ZNF701Q9NV72 531 aaPredicted RBP8.11□□□□□ -1.11
LDLR-211ENST00000560173 FAIMQ9NVQ4 179 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 IL20Q9NYY1 176 aa8.11□□□□□ -1.11
LDLR-211ENST00000560173 IGLV1-36A0A0B4J1U3 117 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 A0A1W2PPL8 197 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 BHLHE40O14503 412 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 EI24O14681 340 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 SLC16A7O60669 478 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 KHDRBS3O75525 346 aaKnown RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 SOX14O95416 240 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 SERPINA5P05154 406 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 ALPLP05186 524 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 SCG5P05408 212 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 LYNP07948 512 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 CST2P09228 141 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 ZNF35P13682 527 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 HIST1H1CP16403 213 aaKnown RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 ZNF32P17041 273 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 MYF6P23409 242 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 LAP3P28838 519 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 CAPGP40121 348 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 PTH2RP49190 550 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 FABP6P51161 128 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NKX6-1P78426 367 aaPredicted RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 IL18R1Q13478 541 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 ENDOGQ14249 297 aaKnown RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 AGAP6Q5VW22 663 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 C11orf71Q6IPW1 123 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 LEG1Q6P5S2 330 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 UGT2A3Q6UWM9 527 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 JAZF1Q86VZ6 243 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 HS3ST5Q8IZT8 346 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 FBXL14Q8N1E6 418 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 MUC15Q8N387 334 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NUP37Q8NFH4 326 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 OR4K13Q8NH42 304 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 FBXO17Q96EF6 278 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 PERPQ96FX8 193 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NMNAT3Q96T66 252 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 SLC29A1Q99808 456 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 ZNF416Q9BWM5 594 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NUAK2Q9H093 628 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 C1orf198Q9H425 327 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 RNF121Q9H920 327 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NTN4Q9HB63 628 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 EMC7Q9NPA0 242 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 CA10Q9NS85 328 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 TBC1D23Q9NUY8 699 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 NDUFA13Q9P0J0 144 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 PDP1Q9P0J1 537 aaPredicted RBP8.1□□□□□ -1.11
LDLR-211ENST00000560173 TLN2Q9Y4G6 2542 aa8.1□□□□□ -1.11
LDLR-211ENST00000560173 OR6C68A6NDL8 312 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 DCTN6O00399 190 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 RENP00797 406 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 GAAP10253 952 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 ANXA8P13928 327 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 NR4A1P22736 598 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 NOS3P29474 1203 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 CRABP1P29762 137 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 APOBEC3AP31941 199 aaPredicted RBP8.09□□□□□ -1.11
LDLR-211ENST00000560173 CDKN1AP38936 164 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
LDLR-211ENST00000560173 PPP2R2BQ00005 443 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 HSF2Q03933 536 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.09□□□□□ -1.11
LDLR-211ENST00000560173 COX10Q12887 443 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 SNTB2Q13425 540 aaKnown RBP8.09□□□□□ -1.11
LDLR-211ENST00000560173 ADIPOQQ15848 244 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 SLC36A3Q495N2 470 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 PABPC1L2AQ5JQF8 200 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 Q5PR19 223 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 SLC35F1Q5T1Q4 408 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 C6orf52Q5T4I8 152 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 TMEM154Q6P9G4 183 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 DNM1P34Q6PK57 102 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 GLB1L2Q8IW92 636 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 OR6V1Q8N148 313 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 LNX2Q8N448 690 aa8.09□□□□□ -1.11
LDLR-211ENST00000560173 PAQR4Q8N4S7 273 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms