RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SAR1AQ9NR31 198 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 GMEB1Q9Y692 573 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
RABGGTA-213ENST00000560127 LOC100509620A0A075B734 347 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 KIR2DS1A0A191URI9 304 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 VSIG8P0DPA2 414 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 BMP2P12643 396 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 MDH2P40926 338 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 HSF2Q03933 536 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 LRRC74AQ0VAA2 488 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 CDK5R2Q13319 367 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 SELPLGQ14242 412 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 MELKQ14680 651 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 NRN1LQ496H8 165 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 C6orf10Q5SRN2 563 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 FAM91A1Q658Y4 838 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 REC114Q7Z4M0 266 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 LRRC18Q8N456 261 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 C10orf53Q8N6V4 93 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 OR5J2Q8NH18 312 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 DYRK2Q92630 601 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 SLC47A1Q96FL8 570 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 FAM71F1Q96KD3 344 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 SAMD8Q96LT4 415 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 CPPED1Q9BRF8 314 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 BCL2L10Q9HD36 194 aa10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-213ENST00000560127 A0A0B4J2E0 115 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 A0A1B0GX12 115 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 C5orf49A4QMS7 147 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 FXYD1O00168 92 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 CSF1P09603 554 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 BPIFB3P59826 476 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 FGF12P61328 243 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 GNB2P62879 340 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 ZMAT1Q5H9K5 638 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 MTX3Q5HYI7 312 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 GPR157Q5UAW9 335 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 KLBQ86Z14 1044 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 MUC20Q8N307 709 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 DPP10Q8N608 796 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 HIPK4Q8NE63 616 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 ABHD4Q8TB40 342 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 MAL2Q969L2 176 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 MCHR2Q969V1 340 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 SLC19A3Q9BZV2 496 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 RMND5AQ9H871 391 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 TAS2R5Q9NYW4 299 aa10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 EIF3KQ9UBQ5 218 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-213ENST00000560127 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 H3BSA7 217 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 CLIC1O00299 241 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 MGRN1O60291 552 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 GPR137BO60478 399 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TROVE2P10155 538 aaKnown RBP eCLIP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 RPS2P15880 293 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 ZNF32P17041 273 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 CPT2P23786 658 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 PRKAR1BP31321 381 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 LOXL3P58215 753 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 PPP1CBP62140 327 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 PSG7Q13046 419 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 KLF10Q13118 480 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 RGNQ15493 299 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 VAX1Q5SQQ9 334 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 METTL21CQ5VZV1 264 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 Q6ZR03 302 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 Q6ZSV7 163 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 C1orf174Q8IYL3 243 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 FITM2Q8N6M3 262 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 ZSCAN4Q8NAM6 433 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 AKR7LQ8NHP1 331 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 ITLN1Q8WWA0 313 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 NUDT16L1Q9BRJ7 211 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TMEM165Q9HC07 324 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 A4GALTQ9NPC4 353 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 PPP1R3CQ9UQK1 317 aa10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 DYNC2H1Q8NCM8 4307 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-213ENST00000560127 TMEM247A6NEH6 219 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 TPST1O60507 370 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 TPST2O60704 377 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 ICMTO60725 284 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 ZNF205O95201 554 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 OR6A2O95222 327 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 MT-ATP6P00846 226 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 OPN1MWP04001 364 aa10.66□□□□□ -0.7
RABGGTA-213ENST00000560127 OPN1MW2P0DN77 364 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms