RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 NKAIN4Q8IVV8 208 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 SIGLECL1Q8N7X8 197 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 AKR7LQ8NHP1 331 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 IPCEF1Q8WWN9 437 aaPredicted RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 STON2Q8WXE9 905 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 HDAC2Q92769 488 aaKnown RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 DVL3Q92997 716 aaPredicted RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 C4orf45Q96LM5 186 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 SAMD8Q96LT4 415 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 DCLRE1CQ96SD1 692 aaKnown RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ECSITQ9BQ95 431 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ALG12Q9BV10 488 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 MRI1Q9BV20 369 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 OR2H1Q9GZK4 316 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 PATZ1Q9HBE1 687 aaKnown RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ESM1Q9NQ30 184 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 MAN2C1Q9NTJ4 1040 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 PLEK2Q9NYT0 353 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 PURGQ9UJV8 347 aaKnown RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 NDRG4Q9ULP0 352 aaKnown RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 UGT2A1Q9Y4X1 527 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 A6NIZ1 184 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 ZSCAN5BA6NJL1 495 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 C12orf71A8MTZ7 269 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 SURF4O15260 269 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 ICMTO60725 284 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 NGFP01138 241 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 IGHMP01871 453 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TSPAN19P0C672 248 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 ZFP36P26651 326 aaKnown RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 LAP3P28838 519 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 SLC6A9P48067 706 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 RAP1BP61224 184 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 RPL27P61353 136 aaKnown RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 RAP1AP62834 184 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 CDK5R2Q13319 367 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 PIN1Q13526 163 aaPredicted RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TMEM155Q4W5P6 130 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 ALG10Q5BKT4 473 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 METTL21CQ5VZV1 264 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 SYT9Q86SS6 491 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TSPYL5Q86VY4 417 aaPredicted RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 LRRC28Q86X40 367 aaPredicted RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 MOSPD2Q8NHP6 518 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 PFN4Q8NHR9 129 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TMEM255BQ8WV15 326 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 SLC25A28Q96A46 364 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 NABP1Q96AH0 204 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 LRRC58Q96CX6 371 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 NMD3Q96D46 503 aaKnown RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 COG8Q96MW5 612 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 MS4A7Q9GZW8 240 aaPredicted RBP7.75□□□□□ -1.17
HDDC3-204ENST00000559834 WNT5BQ9H1J7 359 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 MSL2Q9HCI7 577 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 MMP26Q9NRE1 261 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 C20orf141Q9NUB4 165 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TMEM106BQ9NUM4 274 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 TBCCD1Q9NVR7 557 aa7.75□□□□□ -1.17
HDDC3-204ENST00000559834 IGKV1D-43A0A0B4J1Z2 117 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 IFNL4K9M1U5 179 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ABHD16AO95870 558 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 NPPAP01160 153 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 IGHV2-70P01814 119 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 COX5BP10606 129 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF12P17014 697 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 MSR1P21757 451 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 MTNR1AP48039 350 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 GZMMP51124 257 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 CTXN1P60606 82 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 IL13RA1P78552 427 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 FMODQ06828 376 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ST3GAL3Q11203 375 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 PSG7Q13046 419 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 BAMBIQ13145 260 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 TOP3AQ13472 1001 aaPredicted RBP7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ANKDD1AQ495B1 522 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ESCO2Q56NI9 601 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 BEND6Q5SZJ8 279 aaPredicted RBP7.74□□□□□ -1.17
HDDC3-204ENST00000559834 NANOGP8Q6NSW7 305 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF774Q6NX45 483 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ERICH5Q6P6B1 374 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 RFPL4BQ6ZWI9 263 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 MUC20Q8N307 709 aaPredicted RBP7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF283Q8N7M2 679 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 NPEPL1Q8NDH3 523 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 OR2Z1Q8NG97 314 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 GEMIN6Q8WXD5 167 aaKnown RBP7.74□□□□□ -1.17
HDDC3-204ENST00000559834 BPIFA2Q96DR5 249 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 MAGEB18Q96M61 343 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 NPHS2Q9NP85 383 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 MRGBPQ9NV56 204 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF69Q9UC07 566 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 OR5V1Q9UGF6 321 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 IL19Q9UHD0 177 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 IL20RAQ9UHF4 553 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 PPP1R3CQ9UQK1 317 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms