RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 LIMS1P48059 325 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PCP4P48539 62 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 CRYBA2P53672 197 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PTTG1IPP53801 180 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 TAS2R30P59541 319 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 TMEM52BQ4KMG9 183 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 ACTBL2Q562R1 376 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 TMEM184AQ6ZMB5 413 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 ZNF704Q6ZNC4 412 aaPredicted RBP6.49□□□□□ -1.37
USP3-210ENST00000559192 TSEN54Q7Z6J9 526 aaKnown RBP6.49□□□□□ -1.37
USP3-210ENST00000559192 ADGRE4PQ86SQ3 457 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 OR6N1Q8NGY5 312 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SPIN2AQ99865 258 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SPIN2BQ9BPZ2 258 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SLCO5A1Q9H2Y9 848 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 NTMQ9P121 344 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 VDAC3Q9Y277 283 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 OR2C1O95371 312 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 CFDP00746 253 aaPredicted RBP6.49□□□□□ -1.37
USP3-210ENST00000559192 THBS1P07996 1170 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 MGMTP16455 207 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SERPINA2P20848 420 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
USP3-210ENST00000559192 ZNF626Q68DY1 528 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SGPP2Q8IWX5 399 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 FAM213BQ8TBF2 198 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SGK3Q96BR1 496 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PELI1Q96FA3 418 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 EVA1AQ9H8M9 152 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 FBXO34Q9NWN3 711 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 CPNE7Q9UBL6 633 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SCML1Q9UN30 329 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SLC22A23A1A5C7 686 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 ITGB2P05107 769 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 HNRNPA1P09651 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP3-210ENST00000559192 TBXA2RP21731 343 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PAX6P26367 422 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 CTGFP29279 349 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 RAP1AP62834 184 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 MLC1Q15049 377 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 MED25Q71SY5 747 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 ABHD12BQ7Z5M8 362 aaPredicted RBP6.49□□□□□ -1.37
USP3-210ENST00000559192 SYS1Q8N2H4 156 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 RFLNBQ8N5W9 214 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 OR13C9Q8NGT0 318 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 OR51Q1Q8NH59 317 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 PNPLA2Q96AD5 504 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 RSPRY1Q96DX4 576 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SCMH1Q96GD3 660 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 NMNAT2Q9BZQ4 307 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 SELENOIQ9C0D9 397 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 CYB5R1Q9UHQ9 305 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 KPTNQ9Y664 436 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 RNF215Q9Y6U7 377 aa6.49□□□□□ -1.37
USP3-210ENST00000559192 ARGFXA6NJG6 315 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 MCRIP1C9JLW8 97 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 NQO2P16083 231 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 POU3F2P20265 443 aaPredicted RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 EPHA1P21709 976 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 CRABP1P29762 137 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 GRB2P62993 217 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 SUMO1P63165 101 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 HSD11B2P80365 405 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 MRPS34P82930 218 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 KLF9Q13886 244 aaPredicted RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 HABP2Q14520 560 aaPredicted RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 TMEM215Q68D42 235 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 SHISA6Q6ZSJ9 500 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 DND1Q8IYX4 353 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 BVESQ8NE79 360 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 FAM71CQ8NEG0 241 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR4S1Q8NGB4 309 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 CPT1CQ8TCG5 803 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 ASB17Q8WXJ9 295 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 PHYHIPQ92561 330 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 FGGYQ96C11 551 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 VN1R3Q9BXE9 311 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR5V1Q9UGF6 321 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 ZNF346Q9UL40 294 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 C19orf53Q9UNZ5 99 aaPredicted RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 SLC22A13Q9Y226 551 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 PPIL1Q9Y3C6 166 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 BCL2L11O43521 198 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR2F2O95006 317 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 IGHA1P01876 353 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 CXCL2P19875 107 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 BLKP51451 505 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR2F1Q13607 317 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 ZNF77Q15935 545 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 SEZ6L2Q6UXD5 910 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 MEX3BQ6ZN04 569 aaKnown RBP6.48□□□□□ -1.37
USP3-210ENST00000559192 TMEM151BQ8IW70 566 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 KCNRGQ8N5I3 272 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR5D18Q8NGL1 313 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR2A1Q8NGT9 310 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 OR1S1Q8NH92 325 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 HAVCR2Q8TDQ0 301 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 WDR34Q96EX3 536 aa6.48□□□□□ -1.37
USP3-210ENST00000559192 LRFN5Q96NI6 719 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms