RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	RDH12	Q96NR8	316 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	PITX2	Q99697	317 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	CDADC1	Q9BWV3	514 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	TTTY10	Q9BZA0	68 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	ASH2L	Q9UBL3	628 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	COMMD3-BMI1	R4GMX3	469 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	CRYBG3	Q68DQ2	2970 aa		10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	ANKRD17	O75179	2603 aa	Known RBP	10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	HEATR1	Q9H583	2144 aa	Known RBP	10.84	□□□□□ -0.67
GABPB1-208	ENST00000558970	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC16A6	O15403	523 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	SIAH2	O43255	324 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	GLCE	O94923	617 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	UBL3	O95164	117 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	EPX	P11678	715 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	CCL2	P13500	99 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	GSTT1	P30711	240 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	CAPG	P40121	348 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	VHL	P40337	213 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	NUDT6	P53370	316 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	CDH11	P55287	796 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	ADARB1	P78563	741 aa	Known RBP	10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	KEAP1	Q14145	624 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	PABPC1L2A	Q5JQF8	200 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	FAM27B	Q5VT28	67 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	TMEM53	Q6P2H8	277 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	SEZ6L2	Q6UXD5	910 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	SPATC1	Q76KD6	591 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF627	Q7L945	461 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	SHF	Q7M4L6	423 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	P2RY8	Q86VZ1	359 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	DEPDC4	Q8N2C3	294 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR8J1	Q8NGP2	316 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	CNIH3	Q8TBE1	160 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF582	Q96NG8	517 aa	Predicted RBP	10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	DACH2	Q96NX9	599 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	APOL4	Q9BPW4	351 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR10A4	Q9H209	315 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	LHFPL6	Q9Y693	200 aa		10.83	□□□□□ -0.68
GABPB1-208	ENST00000558970	IGHV1-18	A0A0C4DH31	117 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	CCDC182	A6NF36	153 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	C12orf71	A8MTZ7	269 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF593	O00488	134 aa	Predicted RBP	10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	RER1	O15258	196 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	PRODH	O43272	600 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	DOK2	O60496	412 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	ENTPD6	O75354	484 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	CST2	P09228	141 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	CCNO	P22674	350 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	CRYGS	P22914	178 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	APEX1	P27695	318 aa	Known RBP	10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	PEX19	P40855	299 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	ENTPD1	P49961	510 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	HCCS	P53701	268 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	EFNB1	P98172	346 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	BSPH1	Q075Z2	132 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	LINC01590	Q5TEZ4	76 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	LCN1P1	Q5VSP4	162 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF691	Q5VV52	312 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	NXNL2	Q5VZ03	156 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	TTC23	Q5W5X9	447 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF774	Q6NX45	483 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	MEPCE	Q7L2J0	689 aa	Known RBP	10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	GID4	Q8IVV7	300 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR2AJ1	Q8NGZ0	328 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	FAM222B	Q8WU58	562 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	RADIL	Q96JH8	1075 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	HS3ST6	Q96QI5	342 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	INTS14	Q96SY0	518 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	TEAD3	Q99594	435 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	SPOCK3	Q9BQ16	436 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR2H1	Q9GZK4	316 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	OR51B6	Q9H340	312 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	AMBN	Q9NP70	447 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	B3GNT2	Q9NY97	397 aa		10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.82	□□□□□ -0.68
GABPB1-208	ENST00000558970	LRBA	P50851	2863 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	DCHS2	Q6V1P9	2916 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970		E9PQ18	207 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	ABCD4	O14678	606 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	MMP7	P09237	267 aa	Predicted RBP	10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	CECR9	P0C854	216 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	ARR3	P36575	388 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	PSG4	Q00888	419 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	AQP6	Q13520	282 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	EIF2B1	Q14232	305 aa	Known RBP	10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	SMN1	Q16637	294 aa	Known RBP	10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	NRN1L	Q496H8	165 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	SLC35D3	Q5M8T2	416 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	AADACL4	Q5VUY2	407 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	ADAM5	Q6NVV9	412 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	CFAP77	Q6ZQR2	320 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	DPY19L4	Q7Z388	723 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	TMEM200A	Q86VY9	491 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	ZNF584	Q8IVC4	421 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	CCDC36	Q8IYA8	594 aa		10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.81	□□□□□ -0.68
GABPB1-208	ENST00000558970	CPEB3	Q8NE35	698 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms