RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SMPD3Q9NY59 655 aaPredicted RBP15.18■□□□□ 0.02
TPM1-214ENST00000558544 RAI1Q7Z5J4 1906 aaPredicted RBP15.18■□□□□ 0.02
TPM1-214ENST00000558544 TVP23AA6NH52 213 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 ABCD4O14678 606 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 PLAUP00749 431 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 IGLV1-44P01699 117 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 TFP02787 698 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 CD3EP07766 207 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 PTAFRP25105 342 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 TEKQ02763 1124 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 RAB39AQ14964 217 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 KCNMB1Q16558 191 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 KLHL12Q53G59 568 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 ADAM5Q6NVV9 412 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
TPM1-214ENST00000558544 PACRGLQ8N7B6 248 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 FAM169BQ8N8A8 192 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 OR10H5Q8NGA6 315 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 FAM81AQ8TBF8 368 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 ZNF75AQ96N20 296 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 CLEC4MQ9H2X3 399 aaPredicted RBP15.17■□□□□ 0.02
TPM1-214ENST00000558544 C8orf4Q9NR00 106 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 MRPL22Q9NWU5 206 aaKnown RBP15.17■□□□□ 0.02
TPM1-214ENST00000558544 POLR1DQ9Y2S0 133 aa15.17■□□□□ 0.02
TPM1-214ENST00000558544 A0A1W2PPR1 153 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 C12orf71A8MTZ7 269 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 DLGAP1O14490 977 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 TLX2O43763 284 aaPredicted RBP15.16■□□□□ 0.02
TPM1-214ENST00000558544 ZNF14P17017 642 aaPredicted RBP15.16■□□□□ 0.02
TPM1-214ENST00000558544 GGT2P36268 569 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 LSM6P62312 80 aaKnown RBP15.16■□□□□ 0.02
TPM1-214ENST00000558544 C3orf36Q3SXR2 165 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 PABPC1L2AQ5JQF8 200 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 LINC01590Q5TEZ4 76 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 BCDIN3DQ7Z5W3 292 aaKnown RBP15.16■□□□□ 0.02
TPM1-214ENST00000558544 ZNF584Q8IVC4 421 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 KBTBD8Q8NFY9 601 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 AKR7LQ8NHP1 331 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 TMEM163Q8TC26 289 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 HRASLS5Q96KN8 279 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 RDH12Q96NR8 316 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 IL4I1Q96RQ9 567 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 ASH2LQ9UBL3 628 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 RNF115Q9Y4L5 304 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 APCP25054 2843 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 ABCA12Q86UK0 2595 aa15.16■□□□□ 0.02
TPM1-214ENST00000558544 E9PQ18 207 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 PRODHO43272 600 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 GLCEO94923 617 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 SLC2A5P22732 501 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 FMO3P31513 532 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 CDC42P60953 191 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 PCBD1P61457 104 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 RPS7P62081 194 aaKnown RBP15.15■□□□□ 0.02
TPM1-214ENST00000558544 PSG4Q00888 419 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 AQP6Q13520 282 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 ZNF704Q6ZNC4 412 aaPredicted RBP15.15■□□□□ 0.02
TPM1-214ENST00000558544 LINC00346Q8IVM7 164 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 ZNF511Q8NB15 262 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 ZMYND19Q96E35 227 aaPredicted RBP15.15■□□□□ 0.02
TPM1-214ENST00000558544 TMEM204Q9BSN7 226 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 OR2H1Q9GZK4 316 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 FBXL3Q9UKT7 428 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 MOKQ9UQ07 419 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 GMPPBQ9Y5P6 360 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 LHFPL6Q9Y693 200 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 COMMD3-BMI1R4GMX3 469 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 ROS1P08922 2347 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 PLCE1Q9P212 2302 aa15.15■□□□□ 0.02
TPM1-214ENST00000558544 ZNF823P16415 610 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 CALCRP30988 508 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 VHLP40337 213 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 ADAM8P78325 824 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 EFNB1P98172 346 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 NAAAQ02083 359 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 PLP2Q04941 152 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 SCRN3Q0VDG4 424 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 APOFQ13790 326 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 ZNF774Q6NX45 483 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 CORO6Q6QEF8 472 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 SLC22A25Q6T423 547 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 B3GLCTQ6Y288 498 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 SYT9Q86SS6 491 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 CDC20BQ86Y33 519 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 NEUROG1Q92886 237 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 PITX2Q99697 317 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 WACQ9BTA9 647 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 WNT5BQ9H1J7 359 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 WDR76Q9H967 626 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 FAM118AQ9NWS6 357 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 IMPAD1Q9NX62 359 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 NDRG4Q9ULP0 352 aaKnown RBP15.14■□□□□ 0.01
TPM1-214ENST00000558544 TIMM10BQ9Y5J6 103 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 SETXQ7Z333 2677 aaKnown RBP15.14■□□□□ 0.01
TPM1-214ENST00000558544 RTTNQ86VV8 2226 aa15.14■□□□□ 0.01
TPM1-214ENST00000558544 IGHV2OR16-5A0A0B4J2B6 119 aa15.13■□□□□ 0.01
TPM1-214ENST00000558544 LOC100130705A0A1B0GUX0 176 aa15.13■□□□□ 0.01
TPM1-214ENST00000558544 IQCMA0A1B0GVH7 501 aa15.13■□□□□ 0.01
TPM1-214ENST00000558544 SHISA9B4DS77 424 aa15.13■□□□□ 0.01
TPM1-214ENST00000558544 ATP6V1G2-DDX39BF2Z307 99 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms