RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TMEM269A0A1B0GVZ9 245 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ONECUT2O95948 504 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 SLC2A1P11166 492 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ANOS1P23352 680 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 DCTDP32321 178 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 CLRN1P58418 232 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ROM1Q03395 351 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ZP4Q12836 540 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 KLF9Q13886 244 aaPredicted RBP9.42□□□□□ -0.9
TPM1-210ENST00000558264 FCN2Q15485 313 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 TEX30Q5JUR7 227 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 PEAR1Q5VY43 1037 aaPredicted RBP9.42□□□□□ -0.9
TPM1-210ENST00000558264 B3GNTL1Q67FW5 361 aaPredicted RBP9.42□□□□□ -0.9
TPM1-210ENST00000558264 NOXA1Q86UR1 476 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ZNF227Q86WZ6 799 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 CATSPERDQ86XM0 798 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 TMEM156Q8N614 296 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ASB5Q8WWX0 329 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ITFG2Q969R8 447 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 ZNF775Q96BV0 537 aaPredicted RBP9.42□□□□□ -0.9
TPM1-210ENST00000558264 RNF170Q96K19 258 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 IMMP1LQ96LU5 166 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 WDR54Q9H977 334 aa9.42□□□□□ -0.9
TPM1-210ENST00000558264 NSG1A0A0A6YYJ2 146 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 LOC107986453A0A1B0GWG9 222 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 PTGS2P35354 604 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 POU3F4P49335 361 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 DUSP3P51452 185 aaPredicted RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 TAS2R20P59543 309 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 SNRPD2P62316 118 aaKnown RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 MC2RQ01718 297 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 MFSD13AQ14CX5 517 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 Q5BKY6 102 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 DMRTC1Q5HYR2 192 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 RAET1LQ5VY80 246 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 FAM205BPQ63HN1 556 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 OR10K2Q6IF99 312 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 SLC23A3Q6PIS1 610 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 OR10H5Q8NGA6 315 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 OR13C3Q8NGS6 347 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.9
TPM1-210ENST00000558264 SLC25A44Q96H78 314 aaPredicted RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 ZC3H10Q96K80 434 aaKnown RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 STEAP1Q9UHE8 339 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 POLR1DQ9Y2S0 133 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 A0A1W2PRS3 328 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 SULT2B1O00204 365 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 MSX1P28360 303 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 FOLR3P41439 243 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 P2RY4P51582 365 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 BLVRAP53004 296 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 DNM1P34Q6PK57 102 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 CFAP77Q6ZQR2 320 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 OR2Y1Q8NGV0 311 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 MIB2Q96AX9 1013 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 HAVCR1Q96D42 359 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 SNX18Q96RF0 628 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 POTEKPQ9BYX7 375 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 PTGES2Q9H7Z7 377 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 NXT1Q9UKK6 140 aaKnown RBP9.41□□□□□ -0.9
TPM1-210ENST00000558264 OR52A1Q9UKL2 312 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 AHCTF1Q8WYP5 2266 aa9.41□□□□□ -0.9
TPM1-210ENST00000558264 LOC102723996A0A087X1L8 192 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 FAM47E-STBD1D6RA91 191 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 TP53I11O14683 189 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 KRT33AO76009 404 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 STK17BO94768 372 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 ZNF432O94892 652 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 TRAPPC2P0DI81 140 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 TRAPPC2BP0DI82 140 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 MPLP40238 635 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 PLCZ1Q86YW0 608 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 OR10S1Q8NGN2 331 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 GIMAP1Q8WWP7 306 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 FCAMRQ8WWV6 532 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 SLAMF6Q96DU3 332 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 RBP7Q96R05 134 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 TMEM246Q9BRR3 403 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 OR2B2Q9GZK3 357 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 OR10A4Q9H209 315 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 ZMAT3Q9HA38 289 aaKnown RBP9.4□□□□□ -0.9
TPM1-210ENST00000558264 MOV10Q9HCE1 1003 aaKnown RBP9.4□□□□□ -0.9
TPM1-210ENST00000558264 HRASLSQ9HDD0 168 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 G6PC2Q9NQR9 355 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 KLHL9Q9P2J3 617 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 PISDQ9UG56 409 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 ZNF222Q9UK12 451 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 R4GMQ9 66 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 RTTNQ86VV8 2226 aa9.4□□□□□ -0.9
TPM1-210ENST00000558264 TRAF3IP2O43734 574 aaPredicted RBP9.4□□□□□ -0.9
TPM1-210ENST00000558264 SRSF10O75494 262 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms