RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 MEPEQ9NQ76 525 aaPredicted RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 ICAM5Q9UMF0 924 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 FANCMQ8IYD8 2048 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 FRS3O43559 492 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 CD3DP04234 171 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 TDGF1P13385 188 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 CLDN12P56749 244 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 RNF4P78317 190 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 CYCSP99999 105 aaKnown RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 FZD2Q14332 565 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 NSUN5P2Q63ZY6 315 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 TCEAL6Q6IPX3 200 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 FAM129CQ86XR2 697 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 TMEFF1Q8IYR6 380 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 GABRG1Q8N1C3 465 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 OR2L13Q8N349 312 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 LMNTD1Q8N9Z9 388 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 ZNF383Q8NA42 475 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 ADAMTS17Q8TE56 1095 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 GPX8Q8TED1 209 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 FBXO17Q96EF6 278 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 KLHDC7BQ96G42 594 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 INSM2Q96T92 566 aaPredicted RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 SMAD5Q99717 465 aaKnown RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 MICU1Q9BPX6 476 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 SULT4A1Q9BR01 284 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 TCEAL2Q9H3H9 227 aaPredicted RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 PRDM13Q9H4Q3 707 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 GAR1Q9NY12 217 aaKnown RBP9.85□□□□□ -0.83
USP3-206ENST00000558157 SLC7A7Q9UM01 511 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 TP53TG5Q9Y2B4 290 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 MUC3AQ02505 3323 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 CACNA1IQ9P0X4 2223 aa9.85□□□□□ -0.83
USP3-206ENST00000558157 SPTY2D1-AS1A0A0U1RR47 76 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 FAM157AC9JC47 383 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 M0R296 226 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 NTN1O95631 604 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 LY86O95711 162 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 WNT11O96014 354 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 HMGN2P05204 90 aaKnown RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 FCGR3AP08637 254 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 HPGDP15428 266 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 PSMB6P28072 239 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 CEACAM6P40199 344 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 RAB1AP62820 205 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 ALKBH1Q13686 389 aaKnown RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 LASP1Q14847 261 aaKnown RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 RHEBQ15382 184 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 EIPR1Q53HC9 387 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 ZNF542PQ5EBM4 170 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 RANBP3LQ86VV4 465 aaPredicted RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 OR56B1Q8NGI3 324 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 OR5K2Q8NHB8 316 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 TMED6Q8WW62 240 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 IL17FQ96PD4 163 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 S100A13Q99584 98 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 NRTNQ99748 197 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 CHMP1AQ9HD42 196 aaPredicted RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 TBC1D29Q9UFV1 150 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 STEAP1Q9UHE8 339 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 GNG8Q9UK08 70 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 SIGLEC7Q9Y286 467 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 ABCA7Q8IZY2 2146 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 A0A1W2PR77 199 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 OR52A4PA6NMU1 304 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 SRPX2O60687 465 aaPredicted RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 CTAG2O75638 210 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 RAB3DO95716 219 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 EML2O95834 649 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 TNFP01375 233 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 IL2RAP01589 272 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 HLA-AP01891 365 aaKnown RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 PGAM2P15259 253 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 CD38P28907 300 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 PPICP45877 212 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 NCBP2P52298 156 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■□ 23.8
USP3-206ENST00000558157 MEF2AQ02078 507 aaPredicted RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 Q499Y3 187 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 DHRS11Q6UWP2 260 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 HIST2H3AQ71DI3 136 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 OLIG3Q7RTU3 272 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 NRROSQ86YC3 692 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 DMRTC2Q8IXT2 367 aaPredicted RBP9.84□□□□□ -0.83
USP3-206ENST00000558157 SLC35F2Q8IXU6 374 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 COMMD1Q8N668 190 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 OR2G2Q8NGZ5 317 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 MITD1Q8WV92 249 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 TMEM239Q8WW34 195 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 LCN9Q8WX39 176 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 C3orf49Q96BT1 292 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 KIRREL1Q96J84 757 aa9.84□□□□□ -0.83
USP3-206ENST00000558157 PHB2Q99623 299 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms