RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 WFDC11Q8NEX6 87 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 FBXO17Q96EF6 278 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 RERGLQ9H628 205 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 EGLN3Q9H6Z9 239 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 TBC1D23Q9NUY8 699 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 DNAJB9Q9UBS3 223 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 BAIAP2Q9UQB8 552 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 TIMM10BQ9Y5J6 103 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CIB2O75838 187 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 SNAP29O95721 258 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 HIST1H1CP16403 213 aaKnown RBP10.79□□□□□ -0.68
SLIRP-211ENST00000557623 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
SLIRP-211ENST00000557623 SCRN3Q0VDG4 424 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 SWI5Q1ZZU3 235 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 MST1LQ2TV78 715 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 CLEC12AQ5QGZ9 265 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 UNQ6126/PRO20091Q6UXV3 157 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 OR4K13Q8NH42 304 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 Q96MF0 132 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 BDH2Q9BUT1 245 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF416Q9BWM5 594 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 OR2H1Q9GZK4 316 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 NUAK2Q9H093 628 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 PLK3Q9H4B4 646 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF556Q9HAH1 456 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 PDP1Q9P0J1 537 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-211ENST00000557623 COA3Q9Y2R0 106 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-211ENST00000557623 OTOGQ6ZRI0 2925 aa10.79□□□□□ -0.68
SLIRP-211ENST00000557623 USF3Q68DE3 2245 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 EBAG9O00559 213 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 BHLHE40O14503 412 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 WIPF1O43516 503 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 DEAF1O75398 565 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 FOSL1P15407 271 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 STOMP27105 288 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 PCSK6P29122 969 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 RAD52P43351 418 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 CENPAP49450 140 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 EVX1P49640 407 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 GDI2P50395 445 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 PSG4Q00888 419 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 AQP6Q13520 282 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 LCE2CQ5TA81 110 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 SDR9C7Q8NEX9 313 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 OR2T33Q8NG76 320 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 OR52E2Q8NGJ4 325 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 AKR7LQ8NHP1 331 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 SLCO4A1Q96BD0 722 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 NRBF2Q96F24 287 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 NMNAT3Q96T66 252 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 FEVQ99581 238 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 NIPSNAP1Q9BPW8 284 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 RACGAP1Q9H0H5 632 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 SRA1Q9HD15 236 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 EIF3KQ9UBQ5 218 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 KLHL21Q9UJP4 597 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 NDRG4Q9ULP0 352 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 B9D1Q9UPM9 204 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 FKBP7Q9Y680 259 aa10.78□□□□□ -0.68
SLIRP-211ENST00000557623 CHD3Q12873 2000 aaKnown RBP10.78□□□□□ -0.68
SLIRP-211ENST00000557623 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 ERCC1P07992 297 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-211ENST00000557623 COX5BP10606 129 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 CCL2P13500 99 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 ANXA8P13928 327 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 PPOXP50336 477 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 ERFP50548 548 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 NUDT6P53370 316 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 SELENOVP59797 346 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 GLO1Q04760 184 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 KCNMB1Q16558 191 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 RGS7BPQ6MZT1 257 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-211ENST00000557623 UGT2A3Q6UWM9 527 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 ASRGL1Q7L266 308 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 TMEM179BQ7Z7N9 219 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 ZBTB46Q86UZ6 589 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 OR6V1Q8N148 313 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 LNX2Q8N448 690 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 NPEPL1Q8NDH3 523 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 CPEB3Q8NE35 698 aaKnown RBP10.77□□□□□ -0.69
SLIRP-211ENST00000557623 OR8D4Q8NGM9 314 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 DNAJC9Q8WXX5 260 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
SLIRP-211ENST00000557623 POM121L2Q96KW2 1035 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 FOXN4Q96NZ1 517 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 PLA2G12AQ9BZM1 189 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 WNT5BQ9H1J7 359 aa10.77□□□□□ -0.69
SLIRP-211ENST00000557623 EMC7Q9NPA0 242 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms