RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 CYP3A43Q9HB55 503 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 CHRAC1Q9NRG0 131 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 TMCO1Q9UM00 188 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ANK1P16157 1881 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 HECTD4Q9Y4D8 3996 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 IGHV3-16A0A0C4DH30 117 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 TRBV11-1A0A0K0K1C0 115 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 LOC100131303A0A0U1RQF7 123 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 CCDC182A6NF36 153 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF487B1APH4 448 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 EIF3HO15372 352 aaKnown RBP eCLIP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 OR2F2O95006 317 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 LYPD3O95274 346 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 OTCP00480 354 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 STSP08842 583 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 H2AFZP0C0S5 128 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 COX5AP20674 150 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 UGT1A4P22310 534 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 TUBG1P23258 451 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 ANXA13P27216 316 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 OPRD1P41143 372 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 ELK3P41970 407 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 RPS14P62263 151 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 EIF3IQ13347 325 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 MAB21L1Q13394 359 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 CYLC2Q14093 348 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 GRB7Q14451 532 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 PLCXD3Q63HM9 321 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 SLC22A10Q63ZE4 541 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 XKRXQ6PP77 449 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 PGAP1Q75T13 922 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 NIPA1Q7RTP0 329 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 SSX9Q7RTT3 188 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 LRRC49Q8IUZ0 686 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 GABRG1Q8N1C3 465 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 SLC22A18ASQ8N1D0 253 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 FBXL16Q8N461 479 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 C4orf32Q8N8J7 132 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 GTF3AQ92664 365 aaKnown RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 KIFAP3Q92845 792 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 PSMG2Q969U7 264 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 SGK3Q96BR1 496 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 RMND5BQ96G75 393 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 PRRC1Q96M27 445 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 GSDMAQ96QA5 445 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 TBX15Q96SF7 602 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 OPN3Q9H1Y3 402 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 BLZF1Q9H2G9 400 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 EHD1Q9H4M9 534 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 TUBG2Q9NRH3 451 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 C20orf96Q9NUD7 363 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 AHSPQ9NZD4 102 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 RIMS3Q9UJD0 308 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 NUP50Q9UKX7 468 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 KCNIP3Q9Y2W7 256 aa3.86□□□□□ -1.79
MTHFD1-216ENST00000557539 SMCO2A6NFE2 343 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 HIP1O00291 1037 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 WWP2O00308 870 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 HSD17B6O14756 317 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SPOPO43791 374 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 HCN1O60741 890 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 GPX5O75715 221 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SLC2A10O95528 541 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 LGI1O95970 557 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 CT45A10P0DMU9 189 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 GSTM3P21266 225 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 CD82P27701 267 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 CD1BP29016 333 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 GTF2E2P29084 291 aaKnown RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 IFNA8P32881 189 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 NUP62P37198 522 aaPredicted RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 MRPS11P82912 194 aaKnown RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 CD300CQ08708 224 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SCRN3Q0VDG4 424 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 OXA1LQ15070 435 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 EIPR1Q53HC9 387 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 CARD16Q5EG05 197 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF506Q5JVG8 444 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 TWF2Q6IBS0 349 aaKnown RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SASS6Q6UVJ0 657 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 HSDL2Q6YN16 418 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SCD5Q86SK9 330 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 NUDCD3Q8IVD9 361 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 MICU2Q8IYU8 434 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 TPRX1Q8N7U7 411 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 B3GNT7Q8NFL0 401 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 PAQR8Q8TEZ7 354 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 UFD1Q92890 307 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 SIKE1Q9BRV8 207 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 TUBB1Q9H4B7 451 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 NIPAL2Q9H841 368 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 THUMPD1Q9NXG2 353 aaKnown RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 PEF1Q9UBV8 284 aaKnown RBP3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 ZBED9Q6R2W3 1325 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 MYH8P13535 1937 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 LYSTQ99698 3801 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
MTHFD1-216ENST00000557539 OBSL1O75147 1896 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 FER1L5A0AVI2 2057 aa3.84□□□□□ -1.79
MTHFD1-216ENST00000557539 B4DXG7 233 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms