RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TTTY10Q9BZA0 68 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 NMNAT2Q9BZQ4 307 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 NUAK2Q9H093 628 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SYT4Q9H2B2 425 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 FANCFQ9NPI8 374 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TIGARQ9NQ88 270 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 RPRD1BQ9NQG5 326 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 PAK1IP1Q9NWT1 392 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 IMPAD1Q9NX62 359 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TAS2R16Q9NYV7 291 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ERVK-18Q9QC07 812 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 MCTS1Q9ULC4 181 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 B9D1Q9UPM9 204 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 BAIAP2Q9UQB8 552 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TMA7Q9Y2S6 64 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 NOX1Q9Y5S8 564 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SETD2Q9BYW2 2564 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ABCA2Q9BZC7 2435 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ITPR3Q14573 2671 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 IGKV3D-15A0A087WSY6 115 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 IGLV1-36A0A0B4J1U3 117 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 TRGV8A0A0C4DH27 118 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 LOC102725191A0A1B0GVB3 256 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 PRSS37A4D1T9 235 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF726A6NNF4 738 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RIIAD1A6NNX1 92 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 AHRRA9YTQ3 701 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 PRR23D1E9PI22 279 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC1A7O00341 560 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CCL21O00585 134 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MAGEB4O15481 346 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 DNPH1O43598 174 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SELENOFO60613 162 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC16A7O60669 478 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC19A2O60779 497 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF432O94892 652 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RENP00797 406 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 IFNGP01579 166 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 TFP02787 698 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 QDPRP09417 244 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 PRR23D2P0DMB1 279 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 APEHP13798 732 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CD99P14209 185 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF3P17036 446 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SPI1P17947 270 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 AGAP20933 346 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC2A5P22732 501 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 AGTR1P30556 359 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CDAP32320 146 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CD79BP40259 229 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 NAA10P41227 235 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CSNK1A1P48729 337 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC16A1P53985 500 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CDH11P55287 796 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CLRN1P58418 232 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RPS7P62081 194 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SNRPGP62308 76 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF91Q05481 1191 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 TSC22D1Q15714 1073 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MEP1BQ16820 701 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 NSUN5P2Q63ZY6 315 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 GPR139Q6DWJ6 353 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 KRT80Q6KB66 452 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC25A47Q6Q0C1 308 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MEPCEQ7L2J0 689 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 LIX1LQ8IVB5 337 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 C20orf196Q8IYI0 205 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RFLNBQ8N5W9 214 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 CNEP1R1Q8N9A8 125 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SETD9Q8NE22 299 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 NOXO1Q8NFA2 376 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 OR4F15Q8NGB8 312 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 OR8J1Q8NGP2 316 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 OR6N1Q8NGY5 312 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 OR6X1Q8NH79 312 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 TMEM54Q969K7 222 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MCHR2Q969V1 340 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 LGALS12Q96DT0 336 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RNFT2Q96EX2 444 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ALKBH3Q96Q83 286 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 TBX5Q99593 518 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SF3B5Q9BWJ5 86 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MRPL13Q9BYD1 178 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 OPN3Q9H1Y3 402 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 Q9H521 79 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 RNF122Q9H9V4 155 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 BCO1Q9HAY6 547 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 EMC7Q9NPA0 242 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 SLC7A10Q9NS82 523 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MRPL22Q9NWU5 206 aaKnown RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 VSX1Q9NZR4 365 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-244ENST00000556898 KLHL9Q9P2J3 617 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ENOPH1Q9UHY7 261 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 KLHL21Q9UJP4 597 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 MYRFQ9Y2G1 1151 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 LRCH1Q9Y2L9 728 aa4.66□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF835Q9Y2P0 537 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms