RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CCL2P13500 99 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 STOMP27105 288 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 PPOXP50336 477 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 MSMPQ1L6U9 139 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 DNM1P46Q6ZS02 220 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 AKR7LQ8NHP1 331 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 C18orf12Q96KH6 178 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 COX4I2Q96KJ9 171 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 POM121L2Q96KW2 1035 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 FOXN4Q96NZ1 517 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 TSSK2Q96PF2 358 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 DOK1Q99704 481 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 RACGAP1Q9H0H5 632 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 TBC1D23Q9NUY8 699 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 DNAJB9Q9UBS3 223 aa19.7■□□□□ 0.74
TDP1-216ENST00000556867 TMEM129A0AVI4 362 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 DCTN6O00399 190 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 PCSK6P29122 969 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 EVX1P49640 407 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 ERFP50548 548 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 NUDT6P53370 316 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 LSM6P62312 80 aaKnown RBP19.69■□□□□ 0.74
TDP1-216ENST00000556867 KCNMB1Q16558 191 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 TMEM179BQ7Z7N9 219 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 ALDH16A1Q8IZ83 802 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 OR6V1Q8N148 313 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 SVOPLQ8N434 492 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 FEVQ99581 238 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 NIPSNAP1Q9BPW8 284 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 B9D1Q9UPM9 204 aa19.69■□□□□ 0.74
TDP1-216ENST00000556867 H7C1Q1 480 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 SOX14O95416 240 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 TP53P04637 393 aaPredicted RBP19.68■□□□□ 0.74
TDP1-216ENST00000556867 GAAP10253 952 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 EFNA4P52798 201 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.68■□□□□ 0.74
TDP1-216ENST00000556867 SCRN3Q0VDG4 424 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 COX10Q12887 443 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 AQP6Q13520 282 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 SLC35F1Q5T1Q4 408 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 ZNF774Q6NX45 483 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 ZBTB46Q86UZ6 589 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 LNX2Q8N448 690 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 NPEPL1Q8NDH3 523 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 SDR9C7Q8NEX9 313 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 OR52E2Q8NGJ4 325 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 TSSK6Q9BXA6 273 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 MRPL37Q9BZE1 423 aaKnown RBP19.68■□□□□ 0.74
TDP1-216ENST00000556867 RPRD1BQ9NQG5 326 aaKnown RBP19.68■□□□□ 0.74
TDP1-216ENST00000556867 BAIAP2Q9UQB8 552 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 FKBP7Q9Y680 259 aa19.68■□□□□ 0.74
TDP1-216ENST00000556867 LOC100509620A0A075B734 347 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 OR6C68A6NDL8 312 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 SSX4O60224 188 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 E2F6O75461 281 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 MPZL1O95297 269 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 IGFBP1P08833 259 aaPredicted RBP19.67■□□□□ 0.74
TDP1-216ENST00000556867 FAM157BP0CG42 384 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 COX5BP10606 129 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 GDI2P50395 445 aaKnown RBP19.67■□□□□ 0.74
TDP1-216ENST00000556867 TNK1Q13470 666 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 C1orf146Q5VVC0 180 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 ASRGL1Q7L266 308 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 CIARTQ8N365 385 aaPredicted RBP19.67■□□□□ 0.74
TDP1-216ENST00000556867 C11orf40Q8WZ69 217 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 SORCS2Q96PQ0 1159 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 BCL2L14Q9BZR8 327 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 ARMC1Q9NVT9 282 aa19.67■□□□□ 0.74
TDP1-216ENST00000556867 PDP1Q9P0J1 537 aaPredicted RBP19.67■□□□□ 0.74
TDP1-216ENST00000556867 C5orf49A4QMS7 147 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 INHBBP09529 407 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 RAD52P43351 418 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 UCP2P55851 309 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 GLO1Q04760 184 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 ZNF362Q5T0B9 420 aaPredicted RBP19.66■□□□□ 0.74
TDP1-216ENST00000556867 RGS7BPQ6MZT1 257 aaPredicted RBP19.66■□□□□ 0.74
TDP1-216ENST00000556867 SLC26A10Q8NG04 563 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 OR2T33Q8NG76 320 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 OR4Q3Q8NH05 313 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 DDOQ99489 341 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 SRA1Q9HD15 236 aaKnown RBP19.66■□□□□ 0.74
TDP1-216ENST00000556867 REV1Q9UBZ9 1251 aa19.66■□□□□ 0.74
TDP1-216ENST00000556867 NDRG4Q9ULP0 352 aaKnown RBP19.66■□□□□ 0.74
TDP1-216ENST00000556867 CHD3Q12873 2000 aaKnown RBP19.65■□□□□ 0.74
TDP1-216ENST00000556867 SGCEO43556 437 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 ICMTO60725 284 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 DEAF1O75398 565 aaPredicted RBP19.65■□□□□ 0.74
TDP1-216ENST00000556867 GPANK1O95872 356 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 F12P00748 615 aaPredicted RBP19.65■□□□□ 0.74
TDP1-216ENST00000556867 CCNOP22674 350 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 WNT5AP41221 380 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 CENPAP49450 140 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 OTPQ5XKR4 325 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 CCDC121Q6ZUS5 278 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 VRK1Q99986 396 aaPredicted RBP19.65■□□□□ 0.74
TDP1-216ENST00000556867 SYT3Q9BQG1 590 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 OR51B6Q9H340 312 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 FN3KQ9H479 309 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 DYNLRB1Q9NP97 96 aa19.65■□□□□ 0.74
TDP1-216ENST00000556867 ASH2LQ9UBL3 628 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms