RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NKAIN3Q8N8D7 197 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 UXS1Q8NBZ7 420 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 C17orf47Q8NEP4 570 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 BBS1Q8NFJ9 593 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 OR6K6Q8NGW6 343 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 PFN4Q8NHR9 129 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 ZNF563Q8TA94 476 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 FLVCR1-AS1Q8TAF5 88 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 LRRC20Q8TCA0 184 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 RPS4Y2Q8TD47 263 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 YIPF5Q969M3 257 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 ANKRD9Q96BM1 317 aaPredicted RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 PELI1Q96FA3 418 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 VSTM2LQ96N03 204 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 SCGB3A2Q96PL1 93 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 TBX5Q99593 518 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 WFDC6Q9BQY6 131 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 UTP23Q9BRU9 249 aaKnown RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 SOX7Q9BT81 388 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 ALG12Q9BV10 488 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 NMNAT2Q9BZQ4 307 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 LAT2Q9GZY6 243 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 TCEAL2Q9H3H9 227 aaPredicted RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 NOX3Q9HBY0 568 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 MCCC2Q9HCC0 563 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 C20orf141Q9NUB4 165 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 MED9Q9NWA0 146 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 EIF3KQ9UBQ5 218 aaKnown RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 COPS7AQ9UBW8 275 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 STEAP1Q9UHE8 339 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 IL20RAQ9UHF4 553 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 FOXJ3Q9UPW0 622 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 YARS2Q9Y2Z4 477 aaKnown RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 PCYT1BQ9Y5K3 369 aaPredicted RBP5.51□□□□□ -1.53
CPSF2-205ENST00000556622 NPTNQ9Y639 398 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 DMXL1Q9Y485 3027 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 LAMA1P25391 3075 aa5.51□□□□□ -1.53
CPSF2-205ENST00000556622 NCOR2Q9Y618 2525 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TPRP12270 2363 aaKnown RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TP53BP1Q12888 1972 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TRAV6A0A075B6T7 132 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TRAV36DV7A0A075B6V5 113 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TRAV27A0A087WT01 109 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 A0A1W2PRG6 482 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ANKRD20A5PA0PJZ0 165 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TMEM200CA6NKL6 621 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 KRBOX1C9JBD0 128 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 LMO7DNF2Z398 122 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 NPIPB9F8W1W9 429 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 PEX12O00623 359 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 GPR171O14626 319 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 SSX4O60224 188 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 CTSVO60911 334 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 LDB3O75112 727 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 NCR1O76036 304 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 PMS2P2O95744 297 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ERCC1P07992 297 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 MELTFP08582 738 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 MRPL3P09001 348 aaKnown RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 AKAIN1P0CW23 69 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 GP1BBP13224 206 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 MYF5P13349 255 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 HIST1H1CP16403 213 aaKnown RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 TBPP20226 339 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 NFYAP23511 347 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 IL12BP29460 328 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 PRSS3P35030 304 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 FASLGP48023 281 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 EMDP50402 254 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 P2RX3P56373 397 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 CAV3P56539 151 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 HOXC5Q00444 222 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 PSG6Q00889 435 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 GALK2Q01415 458 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 DUSP2Q05923 314 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 CBFBQ13951 182 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ZNF267Q14586 743 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 MEF2DQ14814 521 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 PRTGQ2VWP7 1150 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 SLC36A2Q495M3 483 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ZNF362Q5T0B9 420 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 C1QTNF12Q5T7M4 302 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 SLC25A25Q6KCM7 469 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 SLC18B1Q6NT16 456 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 LEG1Q6P5S2 330 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 C11orf88Q6PI97 169 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 DHRS13Q6UX07 377 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 GLDNQ6ZMI3 551 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ZNF704Q6ZNC4 412 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 Q6ZSN1 163 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ESPNLQ6ZVH7 1005 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 SLC29A4Q7RTT9 530 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 KMT5CQ86Y97 462 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 OR4N5Q8IXE1 308 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 OR8H3Q8N146 312 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 C9orf62Q8N4C0 152 aa5.5□□□□□ -1.53
CPSF2-205ENST00000556622 ZNF433Q8N7K0 673 aaPredicted RBP5.5□□□□□ -1.53
CPSF2-205ENST00000556622 BCORP1Q8N888 145 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms