RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 C1orf198Q9H425 327 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SLCO1B3Q9NPD5 702 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 G6PC2Q9NQR9 355 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 DDX28Q9NUL7 540 aaKnown RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 GLTPQ9NZD2 209 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 MYEF2Q9P2K5 600 aaKnown RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 EVPLLA8MZ36 301 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CENPBD1B2RD01 187 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 LRRN3E7EW58 273 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 PLPP2O43688 288 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CDC14BO60729 498 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 LYPD3O95274 346 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 MPZL1O95297 269 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 OR8G3PP0DMU2 310 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CBLP22681 906 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 OMGP23515 440 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 AQP5P55064 265 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 PIGFQ07326 219 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF74Q16587 644 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 HIST3H3Q16695 136 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 PCGF3Q3KNV8 242 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 GKAP1Q5VSY0 366 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CARD17Q5XLA6 110 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 C1QL2Q7Z5L3 287 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 PTOV1Q86YD1 416 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 C1QL4Q86Z23 238 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 SKA3Q8IX90 412 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 SLC22A24Q8N4F4 322 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 DPP10Q8N608 796 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-220ENST00000556486 TMBIM4Q9HC24 238 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 TMEM38BQ9NVV0 291 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 TAS2R5Q9NYW4 299 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 CCDC167Q9P0B6 97 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF229Q9UJW7 825 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 SLC13A4Q9UKG4 626 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 WNK2Q9Y3S1 2297 aa8.51□□□□□ -1.05
SCFD1-220ENST00000556486 DNAJC9-AS1A6NH13 148 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 C17orf100A8MU93 164 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF500O60304 480 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-220ENST00000556486 PRSS23O95084 383 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 IGF2P01344 180 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 THY1P04216 161 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ASAH2BP0C7U1 165 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ADORA3P0DMS8 318 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 MALP21145 153 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 AHCYP23526 432 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF133P52736 654 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-220ENST00000556486 BIDP55957 195 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 IL13RA1P78552 427 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 MYBPC1Q00872 1141 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 CD69Q07108 199 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 HNRNPA0Q13151 305 aaKnown RBP8.5□□□□□ -1.05
SCFD1-220ENST00000556486 NPTX1Q15818 432 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 DUSP7Q16829 419 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 RUNDC3AQ59EK9 446 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 KHDC1LQ5JSQ8 128 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ETV3LQ6ZN32 361 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 SLC35D2Q76EJ3 337 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 SLC30A8Q8IWU4 369 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 C11orf65Q8NCR3 313 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 GPR32P1Q8NGA4 272 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 OR6T1Q8NGN1 323 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 FGFBP3Q8TAT2 258 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF519Q8TB69 540 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 EBF4Q9BQW3 602 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 TMEM120AQ9BXJ8 343 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 MRPL13Q9BYD1 178 aaKnown RBP8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF665Q9H7R5 613 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ARMCX1Q9P291 453 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 ANGPT4Q9Y264 503 aa8.5□□□□□ -1.05
SCFD1-220ENST00000556486 A0A0G2JMP0 313 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 A0A0X1KG70 313 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 NPIPB13A6NJU9 1138 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 NUDT19A8MXV4 375 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 NPIPB4C9JG80 1138 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 DHHO43323 396 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 FARS2O95363 451 aaKnown RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 LY86O95711 162 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 PTHP01270 115 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 TSPAN19P0C672 248 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 ANPEPP15144 967 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 AQP1P29972 269 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 CRYBB2P43320 205 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 KLF3P57682 345 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 SELENOVP59797 346 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 CD83Q01151 205 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 ENTPD8Q5MY95 495 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 DCAF12L2Q5VW00 463 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 RGS7BPQ6MZT1 257 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 LEG1Q6P5S2 330 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
SCFD1-220ENST00000556486 BCL6BQ8N143 479 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-220ENST00000556486 SLC30A7Q8NEW0 376 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms