RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GEMIN7Q9H840 131 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 MTHFD2LQ9H903 347 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 KRCC1Q9NPI7 259 aaPredicted RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 HINT3Q9NQE9 182 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 PTTG2Q9NZH5 202 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 TMEM9Q9P0T7 183 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 PISDQ9UG56 409 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 SATB2Q9UPW6 733 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 GRIP1Q9Y3R0 1128 aa4.55□□□□□ -1.68
SRP54-211ENST00000556445 TDRD6O60522 2096 aaKnown RBP4.55□□□□□ -1.68
SRP54-211ENST00000556445 CEP192Q8TEP8 1941 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 C12orf71A8MTZ7 269 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 C4orf51C9J302 202 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 J3QR06 171 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 DUX1O43812 170 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 UPK3AO75631 287 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 CRTAPO75718 401 aaPredicted RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 UGT2B17O75795 530 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 NSA2O95478 260 aaKnown RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 ZBTB11O95625 1053 aaPredicted RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 CPNE6O95741 557 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ANGPTL1O95841 491 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 OPN1SWP03999 348 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 WNT1P04628 370 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 H1F0P07305 194 aaKnown RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 FGF2P09038 288 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 GNAO1P09471 354 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ALOX5P09917 674 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SLC35E2P0CK97 266 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 TNFRSF1BP20333 461 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 GSTM3P21266 225 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PCMT1P22061 227 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PRKACGP22612 351 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 CRHBPP24387 322 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SLC6A8P48029 635 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SLC9A3P48764 834 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 IST1P53990 364 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 UGT2B15P54855 530 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 CLDN15P56746 228 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 VSX2P58304 361 aaPredicted RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 SELENOVP59797 346 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 IL5RAQ01344 420 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SLAQ13239 276 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 FHL1Q13642 323 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 DGCR6Q14129 220 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SERTAD2Q14140 314 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 SYPL1Q16563 259 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PRTGQ2VWP7 1150 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ARHGAP11BQ3KRB8 267 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ANXA2RQ3ZCQ2 193 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ZBED5Q49AG3 693 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ZNF542PQ5EBM4 170 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 NKAIN2Q5VXU1 208 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 LCN10Q6JVE6 187 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 TMEM107Q6UX40 140 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PLXDC2Q6UX71 529 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 Q6ZPB1 254 aaPredicted RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 IL17RELQ6ZVW7 336 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 KCTD8Q6ZWB6 473 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 LHFPL4Q7Z7J7 247 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 TMEM179BQ7Z7N9 219 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 GALNT10Q86SR1 603 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 TMPRSS12Q86WS5 348 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 DNAJC22Q8N4W6 341 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 CHDHQ8NE62 594 aaPredicted RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 OR4C15Q8NGM1 316 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 OR13F1Q8NGS4 319 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 CD300LFQ8TDQ1 290 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PATE1Q8WXA2 126 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 RAB8BQ92930 207 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 GPR137Q96N19 417 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ZNF285Q96NJ3 590 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 OR7D2Q96RA2 312 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 NRTNQ99748 197 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 KCNS3Q9BQ31 491 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 FNDC11Q9BVV2 318 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PRRG3Q9BZD7 231 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PIGUQ9H490 435 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 MOV10Q9HCE1 1003 aaKnown RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 Q9N2K0 584 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 PLCXD1Q9NUJ7 323 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 VNN3Q9NY84 501 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 ERVK-18Q9QC07 812 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 RSL24D1Q9UHA3 163 aaKnown RBP4.54□□□□□ -1.68
SRP54-211ENST00000556445 TBC1D24Q9ULP9 559 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 HS3ST3B1Q9Y662 390 aa4.54□□□□□ -1.68
SRP54-211ENST00000556445 NINQ8N4C6 2090 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SCN3AQ9NY46 2000 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DSPPQ9NZW4 1301 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SNTNA6NMZ2 147 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 WASHC1A8K0Z3 465 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SLC1A7O00341 560 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 TOX3O15405 576 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 P2RX6O15547 441 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ZNF749O43361 778 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CHST10O43529 356 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 TLX3O43711 291 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms