RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 OR52E2Q8NGJ4 325 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 OR8D4Q8NGM9 314 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 GIPC3Q8TF64 312 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 C11orf40Q8WZ69 217 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SLCO4A1Q96BD0 722 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SNX18Q96RF0 628 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 DOK1Q99704 481 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 MMADHCQ9H3L0 296 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-217ENST00000556203 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
ACTN1-217ENST00000556203 TBC1D23Q9NUY8 699 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 FZR1Q9UM11 496 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 TMEM129A0AVI4 362 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 C5orf49A4QMS7 147 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 DCTN6O00399 190 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 BHLHE40O14503 412 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 SMAD7O15105 426 aaKnown RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 E2F6O75461 281 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 GPANK1O95872 356 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 INHBBP09529 407 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 GDI2P50395 445 aaKnown RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 EFNA4P52798 201 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 SCRN3Q0VDG4 424 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 DBPQ10586 325 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 ZNF774Q6NX45 483 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 POM121L2Q96KW2 1035 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 SORCS2Q96PQ0 1159 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 FEVQ99581 238 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 SYT3Q9BQG1 590 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 WACQ9BTA9 647 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 MRPL37Q9BZE1 423 aaKnown RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 FN3KQ9H479 309 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 SRA1Q9HD15 236 aaKnown RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 DYNLRB1Q9NP97 96 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 ARMC1Q9NVT9 282 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 PDP1Q9P0J1 537 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-217ENST00000556203 B9D1Q9UPM9 204 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 HIVEP1P15822 2718 aa13.08□□□□□ -0.32
ACTN1-217ENST00000556203 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 IGLV1-36A0A0B4J1U3 117 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 OR6C68A6NDL8 312 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 ARRDC5A6NEK1 342 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 FAM171A2A8MVW0 826 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 LY6HO94772 140 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 LCKP06239 509 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 GAAP10253 952 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 PCSK6P29122 969 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 RAD52P43351 418 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 PPOXP50336 477 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 UCP2P55851 309 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 AQP6Q13520 282 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 RGS7BPQ6MZT1 257 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 DNM1P46Q6ZS02 220 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 HS3ST5Q8IZT8 346 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 ICA1LQ8NDH6 482 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 OR4Q3Q8NH05 313 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 SMR3AQ99954 134 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 GSX1Q9H4S2 264 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 EIF3KQ9UBQ5 218 aaKnown RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 DUSP13Q9UII6 198 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 FBXO9Q9UK97 447 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-217ENST00000556203 POLR1DQ9Y2S0 133 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 FKBP7Q9Y680 259 aa13.07□□□□□ -0.32
ACTN1-217ENST00000556203 CELSR1Q9NYQ6 3014 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 DOK2O60496 412 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 TIPRLO75663 272 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-217ENST00000556203 TP53P04637 393 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-217ENST00000556203 EVX1P49640 407 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 GLO1Q04760 184 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 COX10Q12887 443 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 KCNMB1Q16558 191 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 MEP1BQ16820 701 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 CLEC2AQ6UVW9 174 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 CD300LDQ6UXZ3 194 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 ZBTB46Q86UZ6 589 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 LRP11Q86VZ4 500 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 LNX2Q8N448 690 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 ZNF525Q8N782 197 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 CYB561A3Q8NBI2 242 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 OR2T33Q8NG76 320 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 BCL2L14Q9BZR8 327 aa13.06□□□□□ -0.32
ACTN1-217ENST00000556203 MYEF2Q9P2K5 600 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms