RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TMEM239Q8WW34 195 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NSMAFQ92636 917 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SGTBQ96EQ0 304 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NTN4Q9HB63 628 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PATZ1Q9HBE1 687 aaKnown RBP12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 UBAP1Q9NZ09 502 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 EGFL7Q9UHF1 273 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 WNK1Q9H4A3 2382 aa12.09□□□□□ -0.47
CHMP4BP1-201ENST00000556017 A8MXK9 166 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 H3BSA7 217 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 OR5F1O95221 314 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 IGHMP01871 453 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 MT-ND5P03915 603 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CST2P09228 141 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 GCH1P30793 250 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 OR1E2P47887 323 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SLC6A9P48067 706 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 GDI2P50395 445 aaKnown RBP12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ERFP50548 548 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ZNF154Q13106 437 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 RABL3Q5HYI8 236 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 AGBL2Q5U5Z8 902 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 NANOGP8Q6NSW7 305 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SLC30A8Q8IWU4 369 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 LRRC8CQ8TDW0 803 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 POP5Q969H6 163 aaKnown RBP12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 DACT3Q96B18 629 aaPredicted RBP12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CCNB1IP1Q9NPC3 277 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 DDX28Q9NUL7 540 aaKnown RBP12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 INSIG2Q9Y5U4 225 aa12.08□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ISPDA4D126 451 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 FOXH1O75593 365 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 FPR2P25090 351 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CD47Q08722 323 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 FOXL1Q12952 345 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 NFYCQ13952 458 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TTMPQ5BVD1 217 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 MTX3Q5HYI7 312 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 LRRC28Q86X40 367 aaPredicted RBP12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CYSLTR2Q9NS75 346 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 MAN2C1Q9NTJ4 1040 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 PLEK2Q9NYT0 353 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 NUP50Q9UKX7 468 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ZDHHC8Q9ULC8 765 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 A4GNTQ9UNA3 340 aa12.07□□□□□ -0.48
CHMP4BP1-201ENST00000556017 PLSCR5A0PG75 271 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ANGPT2O15123 496 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SBK2P0C263 348 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CD80P33681 288 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 LIPAP38571 399 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TNFAIP6P98066 277 aaPredicted RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 PAX8Q06710 450 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SLC3A1Q07837 685 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TOP3AQ13472 1001 aaPredicted RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ALG10Q5BKT4 473 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 INTS11Q5TA45 600 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 IGFN1Q86VF2 1251 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ZNF583Q96ND8 569 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 DCLRE1CQ96SD1 692 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ALG12Q9BV10 488 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 POLR2J2Q9GZM3 115 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 EGLN1Q9GZT9 426 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 POLR2J3Q9H1A7 115 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 EIF3KQ9UBQ5 218 aaKnown RBP12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TIMM10BQ9Y5J6 103 aa12.06□□□□□ -0.48
CHMP4BP1-201ENST00000556017 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 KITLGP21583 273 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 TAS2R41P59536 307 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 C1orf174Q8IYL3 243 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 ST7LQ8TDW4 575 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SLC26A7Q8TE54 656 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 RASSF5Q8WWW0 418 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 DIRC2Q96SL1 478 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 KCNN2Q9H2S1 579 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 UNKLQ9H9P5 680 aaKnown RBP12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 EMC7Q9NPA0 242 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 POLE4Q9NR33 117 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 STX18Q9P2W9 335 aaKnown RBP12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 STARD10Q9Y365 291 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 SNX13Q9Y5W8 968 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CLDN34H7C241 214 aa12.04□□□□□ -0.48
CHMP4BP1-201ENST00000556017 FFAR1O14842 300 aa12.04□□□□□ -0.48
CHMP4BP1-201ENST00000556017 THRBP10828 461 aa12.04□□□□□ -0.48
CHMP4BP1-201ENST00000556017 CTXN1P60606 82 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms