RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CYB5AP00167 134 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CD3DP04234 171 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L2P0CJ85 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L3P0CJ86 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L4P0CJ87 422 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L5P0CJ88 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L6P0CJ89 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4L7P0CJ90 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF35P13682 527 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PPP3CBP16298 524 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF823P16415 610 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 FSTP19883 344 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CD27P26842 260 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 RAP1BP61224 184 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 RAP1AP62834 184 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 HSD11B2P80365 405 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PLA2G7Q13093 441 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 GK2Q14410 553 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 KCNAB1Q14722 419 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 COL19A1Q14993 1142 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TOMM34Q15785 309 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 NHLRC3Q5JS37 347 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 YOD1Q5VVQ6 348 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 NKAIN2Q5VXU1 208 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 B3GNTL1Q67FW5 361 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR7E24Q6IFN5 339 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TSSK4Q6SA08 328 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMEM205Q6UW68 189 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 NHLRC1Q6VVB1 395 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 Q6ZS52 159 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMUB2Q71RG4 321 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 GRINAQ7Z429 371 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ADGRE4PQ86SQ3 457 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 CDH26Q8IXH8 852 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 C9orf40Q8IXQ3 194 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 GABRG1Q8N1C3 465 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 MUC20Q8N307 709 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR2AK2Q8NG84 335 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR52B4Q8NGK2 314 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR6M1Q8NGM8 313 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR5M1Q8NGP8 315 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR1J4Q8NGS1 313 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 OR13C3Q8NGS6 347 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 STK35Q8TDR2 534 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 TMEM234Q8WY98 164 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ATOH1Q92858 354 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLC41A2Q96JW4 573 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 FOXN4Q96NZ1 517 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLC25A21Q9BQT8 299 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 ABHD6Q9BV23 337 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 PHF7Q9BWX1 381 aaPredicted RBP6.3□□□□□ -1.4
TDP1-213ENST00000555880 RAB33BQ9H082 229 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ARL6Q9H0F7 186 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 ZNF304Q9HCX3 659 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 DUX4Q9UBX2 424 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 HHLA2Q9UM44 414 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SLC22A13Q9Y226 551 aa6.3□□□□□ -1.4
TDP1-213ENST00000555880 SEC16AO15027 2179 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 RP1P56715 2156 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ALPK2Q86TB3 2170 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 KIF26BQ2KJY2 2108 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 A0A0A6YYH2 397 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 MEIS3P1A6NDR6 274 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 A6NJ64 397 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 NPIPA5E9PKD4 350 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 SOX1O00570 391 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 PLPP3O14495 311 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 MBTPS2O43462 519 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 TSPAN2O60636 221 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 RAD1O60671 282 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 B3GALNT1O75752 331 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 KDM4BO94953 1096 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 WNT11O96014 354 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 IGHMP01871 453 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CTLA4P16410 223 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ENPP1P22413 925 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ABCD3P28288 659 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 DAP3P51398 398 aaKnown RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 MAP2K6P52564 334 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 SLC26A5P58743 744 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 HNRNPKP61978 463 aaKnown RBP eCLIP6.29□□□□□ -1.4
TDP1-213ENST00000555880 HLXQ14774 488 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 DEFB133Q30KQ1 61 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 C14orf28Q4W4Y0 310 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 GLYATL3Q5SZD4 288 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 ZNF704Q6ZNC4 412 aaPredicted RBP6.29□□□□□ -1.4
TDP1-213ENST00000555880 SYT13Q7L8C5 426 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CATSPERDQ86XM0 798 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 MISPQ8IVT2 679 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 NAXDQ8IW45 347 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 CARFQ8N187 725 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 JAGN1Q8N5M9 183 aa6.29□□□□□ -1.4
TDP1-213ENST00000555880 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms