RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ANKRD12Q6UB98 2062 aa1.58□□□□□ -2.16
SCFD1-216ENST00000555550 TRAV6A0A075B6T7 132 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF878C9JN71 531 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 PSTPIP1O43586 416 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 C1orf105O95561 183 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 CD86P42081 329 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 ACTG2P63267 376 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 CDH17Q12864 832 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 TMEM256Q8N2U0 113 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 APCDD1LQ8NCL9 501 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 OR5M1Q8NGP8 315 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 OR10J6PQ8NGY7 276 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 OR2T3Q8NH03 318 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 RHEBL1Q8TAI7 183 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 CXorf40AQ8TE69 158 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 C17orf50Q8WW18 174 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 TMEM43Q9BTV4 400 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 SLC38A10Q9HBR0 1119 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 SGK2Q9HBY8 427 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF639Q9UID6 485 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 AP1M2Q9Y6Q5 423 aa1.57□□□□□ -2.16
SCFD1-216ENST00000555550 IGHV3OR16-8A0A075B7F1 116 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 A0A1B0GVL5 298 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 OR6C74A6NCV1 312 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 PCP4L1A6NKN8 68 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 H0YJW9 148 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ANGPT2O15123 496 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CHST10O43529 356 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 NOL3O60936 208 aaKnown RBP1.56□□□□□ -2.16
SCFD1-216ENST00000555550 FGGP02679 453 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 OR8U9P0C7N5 309 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 WARSP23381 471 aaKnown RBP1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CEACAM3P40198 252 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 RBX1P62877 108 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 FUT5Q11128 374 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CASP12Q6UXS9 341 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 SLC16A13Q7RTY0 426 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CDKL3Q8IVW4 592 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-216ENST00000555550 LIX1Q8N485 282 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 EID2Q8N6I1 236 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF680Q8NEM1 530 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 TCEANC2Q96MN5 208 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 SERPINB12Q96P63 405 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 SHANK2-AS3Q9BTD1 123 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ANGPTL4Q9BY76 406 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ANKRD19PQ9H560 264 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CTNNA3Q9UI47 895 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 CBY1Q9Y3M2 126 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ATP6V0A2Q9Y487 856 aa1.56□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF407Q9C0G0 2248 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 MYO16Q9Y6X6 1858 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 A0A1W2PNN7 141 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 TMEM120BA0PK00 339 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 MAGEB3O15480 346 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 SOCS1O15524 211 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF208O43345 1280 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 TIMM8AO60220 97 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 DPM1O60762 260 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 ME2P23368 584 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 F2RP25116 425 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 PRMT2P55345 433 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 TAS2R31P59538 309 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 YWHAGP61981 247 aaKnown RBP eCLIP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF77Q15935 545 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 IMMTQ16891 758 aaKnown RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 MPV17L2Q567V2 206 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 CCDC73Q6ZRK6 1079 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 PSTKQ8IV42 348 aaKnown RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 OR1L4Q8NGR5 311 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 OR6N1Q8NGY5 312 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 PTX4Q96A99 478 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 TSSC4Q9Y5U2 329 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 PEX16Q9Y5Y5 336 aa1.55□□□□□ -2.16
SCFD1-216ENST00000555550 DDX49Q9Y6V7 483 aaKnown RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 AHDC1Q5TGY3 1603 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-216ENST00000555550 TRAV19A0A0A6YYK7 116 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF816-ZNF321PA0A0X1KG74 233 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 BTNL10A8MVZ5 291 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 GPR89AB7ZAQ6 455 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 HAS3O00219 553 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 SNNO75324 88 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-216ENST00000555550 IGLV6-57P01721 117 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 GPR89BP0CG08 455 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 OR5H8P0DN80 308 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 LGALS3P17931 250 aaKnown RBP1.54□□□□□ -2.16
SCFD1-216ENST00000555550 CCNG1P51959 295 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 VSX2P58304 361 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-216ENST00000555550 BPIFB3P59826 476 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 CRADDP78560 199 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 PDK3Q15120 406 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 CFAP157Q5JU67 520 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 SLC25A24Q6NUK1 477 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 PDIK1LQ8N165 341 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 ZNF664Q8N3J9 261 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 MRGPRFQ96AM1 343 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 SEH1LQ96EE3 360 aa1.54□□□□□ -2.16
SCFD1-216ENST00000555550 DNAJC1Q96KC8 554 aaKnown RBP1.54□□□□□ -2.16
SCFD1-216ENST00000555550 COL21A1Q96P44 957 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms