RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 FOXN4Q96NZ1 517 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 EMC7Q9NPA0 242 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 NPAP1Q9NZP6 1156 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 FBXL3Q9UKT7 428 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 TIMM10BQ9Y5J6 103 aa11.05□□□□□ -0.64
SYNE2-219ENST00000555323 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 SLC22A31A6NKX4 558 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 DEFB108AA8MXU0 73 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 M0R129 80 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 HLA-DQA2P01906 255 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 SERPINA5P05154 406 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 PATE4P0C8F1 98 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 CD79AP11912 226 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF823P16415 610 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF32P17041 273 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-219ENST00000555323 GSTT1P30711 240 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 HTR1FP30939 366 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 PSG4Q00888 419 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 PIGFQ07326 219 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 AQP6Q13520 282 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 APOFQ13790 326 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 GGTLC2Q14390 218 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 MEP1BQ16820 701 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 BEX5Q5H9J7 111 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 MDP1Q86V88 176 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 SETD9Q8NE22 299 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 IL17RDQ8NFM7 739 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 FBLIM1Q8WUP2 373 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 CYGBQ8WWM9 190 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 RFKQ969G6 155 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF582Q96NG8 517 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-219ENST00000555323 WDR76Q9H967 626 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 NOX3Q9HBY0 568 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
SYNE2-219ENST00000555323 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 COMMD3-BMI1R4GMX3 469 aa11.04□□□□□ -0.64
SYNE2-219ENST00000555323 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
SYNE2-219ENST00000555323 DPRXA6NFQ7 191 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TVP23AA6NH52 213 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF593O00488 134 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-219ENST00000555323 SIAH2O43255 324 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TMCC2O75069 709 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 CLIC3O95833 236 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 COX5BP10606 129 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 COX6B1P14854 86 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 PTAFRP25105 342 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 COL8A1P27658 744 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 CAPZA2P47755 286 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 HSPA13P48723 471 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 ENTPD1P49961 510 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TUBA1BP68363 451 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TUBA4AP68366 448 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 SCRN3Q0VDG4 424 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 MAD2L1BPQ15013 274 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-219ENST00000555323 SNCBQ16143 134 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 LCN1P1Q5VSP4 162 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TMEM53Q6P2H8 277 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 LYPD4Q6UWN0 246 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 B3GLCTQ6Y288 498 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 TUBA1AQ71U36 451 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 RHOUQ7L0Q8 258 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 WFDC8Q8IUA0 241 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF584Q8IVC4 421 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 OR10H5Q8NGA6 315 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 OR6K6Q8NGW6 343 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 APH1BQ8WW43 257 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 ZMYND19Q96E35 227 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-219ENST00000555323 Q96MT0 163 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 INTS14Q96SY0 518 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 CDADC1Q9BWV3 514 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 OR2H1Q9GZK4 316 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 RNF121Q9H920 327 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 CCNB1IP1Q9NPC3 277 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 ASH2LQ9UBL3 628 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.03□□□□□ -0.64
SYNE2-219ENST00000555323 DOPEY2Q9Y3R5 2298 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
SYNE2-219ENST00000555323 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 SNTNA6NMZ2 147 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 ENTPD6O75354 484 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 WBP4O75554 376 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 PTHP01270 115 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 GNAO1P09471 354 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 CD40P25942 277 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 NR1H2P55055 460 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 CDH11P55287 796 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 RPS7P62081 194 aaKnown RBP11.02□□□□□ -0.65
SYNE2-219ENST00000555323 ADAM8P78325 824 aa11.02□□□□□ -0.65
SYNE2-219ENST00000555323 PLP2Q04941 152 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms