RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 F8VP50 259 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 H7C0C1 242 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 PGAM1P18669 254 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 ATP6V1B2P21281 511 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 UGT2B10P36537 528 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 PLK1P53350 603 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 PAX8Q06710 450 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 ITGB3BPQ13352 177 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 MAD2L1BPQ15013 274 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 LTB4RQ15722 352 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 KCTD19Q17RG1 926 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 KLF17Q5JT82 389 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 GDPD3Q7L5L3 318 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 SETD3Q86TU7 594 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 UNC93AQ86WB7 457 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 KIR2DL5AQ8N109 375 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 SNX31Q8N9S9 440 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 Q8NBF4 154 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 KIR2DL5BQ8NHK3 375 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 TFB1MQ8WVM0 346 aaKnown RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 EEF1AKMT3Q96AZ1 226 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 MED8Q96G25 268 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 ITCHQ96J02 903 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 ZNF75AQ96N20 296 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 WDR55Q9H6Y2 383 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 UCK1Q9HA47 277 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 SIAEQ9HAT2 523 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 MRM3Q9HC36 420 aaKnown RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 SIRT7Q9NRC8 400 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 RMND1Q9NWS8 449 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 OR1A1Q9P1Q5 309 aa4.02□□□□□ -1.77
VRK1-203ENST00000555067 COL22A1Q8NFW1 1626 aaPredicted RBP4.02□□□□□ -1.77
VRK1-203ENST00000555067 RLFQ13129 1914 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 IGHV1OR21-1A0A087WYE8 117 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 ZNF816-ZNF321PA0A0X1KG74 233 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 TVP23AA6NH52 213 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 SAP18O00422 153 aaKnown RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 COCHO43405 550 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 BCL2L11O43521 198 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 MGRN1O60291 552 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 EIF3GO75821 320 aaKnown RBP eCLIP4.01□□□□□ -1.77
VRK1-203ENST00000555067 MYO1DO94832 1006 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 LDOC1O95751 146 aaPredicted RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 RENP00797 406 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 CATP04040 527 aaKnown RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 STSP08842 583 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 LAMP1P11279 417 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 FOLR1P15328 257 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 VDAC1P21796 283 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 IGHV1-2P23083 117 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 LMO2P25791 158 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 KIR2DS2P43631 304 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 PRLHRP49683 370 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 MLF1P58340 268 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 SLC25A11Q02978 314 aaKnown RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 C2orf80Q0P641 193 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 CYLC2Q14093 348 aaPredicted RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 DGCR6Q14129 220 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 TFAP2EQ6VUC0 442 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 VKORC1L1Q8N0U8 176 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 SLC22A18ASQ8N1D0 253 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 POM121L12Q8N7R1 296 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 COL21A1Q96P44 957 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 TIMM29Q9BSF4 260 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 POTEKPQ9BYX7 375 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 NSRP1Q9H0G5 558 aaKnown RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 IMPAD1Q9NX62 359 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 KCNIP1Q9NZI2 227 aa4.01□□□□□ -1.77
VRK1-203ENST00000555067 ZNF282Q9UDV7 671 aaPredicted RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 PRRC2AP48634 2157 aaKnown RBP4.01□□□□□ -1.77
VRK1-203ENST00000555067 IGHV3-16A0A0C4DH30 117 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RBMY1BA6NDE4 496 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 RBMY1EA6NEQ0 496 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 FABP12A6NFH5 140 aa4□□□□□ -1.77
VRK1-203ENST00000555067 EFCAB7A8K855 629 aa4□□□□□ -1.77
VRK1-203ENST00000555067 LYRM9A8MSI8 78 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ZNF487B1APH4 448 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ERVV-1B6SEH8 477 aa4□□□□□ -1.77
VRK1-203ENST00000555067 PRAMEF26H0Y7S4 382 aa4□□□□□ -1.77
VRK1-203ENST00000555067 M0QXV9 152 aa4□□□□□ -1.77
VRK1-203ENST00000555067 EMC8O43402 210 aa4□□□□□ -1.77
VRK1-203ENST00000555067 ACTL6AO96019 429 aa4□□□□□ -1.77
VRK1-203ENST00000555067 GP1BAP07359 652 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RHOCP08134 193 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RBMY1DP0C7P1 496 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 SLC35E2BP0CK96 405 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RBMY1A1P0DJD3 496 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 CSNK2A2P19784 350 aaPredicted RBP4□□□□□ -1.77
VRK1-203ENST00000555067 CXCR2P25025 360 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RBM34P42696 430 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 CSNK1DP48730 415 aa4□□□□□ -1.77
VRK1-203ENST00000555067 PRELPP51888 382 aa4□□□□□ -1.77
VRK1-203ENST00000555067 STX17P56962 302 aa4□□□□□ -1.77
VRK1-203ENST00000555067 RPL32P62910 135 aaKnown RBP4□□□□□ -1.77
VRK1-203ENST00000555067 SLC35B1P78383 322 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms