RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ACY3Q96HD9 319 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 OR51I2Q9H344 312 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 ZDHHC18Q9NUE0 388 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 CLEC1BQ9P126 229 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 TRAV36DV7A0A075B6V5 113 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 GABRPO00591 440 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 PLRG1O43660 514 aaKnown RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 CTSAP10619 480 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF93P35789 620 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 WNT7BP56706 349 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 RAB38P57729 211 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 BTNL8Q6UX41 500 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.4
SYNE2-216ENST00000555002 KIAA1217Q5T5P2 1943 aa6.34□□□□□ -1.4
SYNE2-216ENST00000555002 A0A0B4J203 849 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 GLRA1P23415 457 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PXDC1Q5TGL8 231 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SFTPA2Q8IWL1 248 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SFTPA1Q8IWL2 248 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 UMODL1-AS1Q8N2C9 162 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PLPP7Q8NBV4 271 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PXT1Q8NFP0 134 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OR5A2Q8NGI9 324 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 LURAP1Q96LR2 239 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SEMA4GQ9NTN9 838 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 J3KTA2 159 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 GPR75O95800 540 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OPN1MWP04001 364 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OPN1MW2P0DN77 364 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OPN1MW3P0DN78 364 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF266Q14584 549 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PM20D1Q6GTS8 502 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RPL22L1Q6P5R6 122 aaKnown RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 DHRS11Q6UWP2 260 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OR2AE1Q8NHA4 323 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 DTD1Q8TEA8 209 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 KHSRPQ92945 711 aaKnown RBP eCLIP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 UBE2L5PA0A1B0GUS4 154 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 GLI4P10075 376 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 CCR6P51684 374 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TAS2R45P59539 299 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RING1Q06587 406 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 FABP9Q0Z7S8 132 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TBCEQ15813 527 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 PRTGQ2VWP7 1150 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 KDM4DQ6B0I6 523 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OR5M9Q8NGP3 310 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 BLNKQ8WV28 456 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SLC45A3Q96JT2 553 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TXNIPQ9H3M7 391 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 AAMDCQ9H7C9 122 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 USP3Q9Y6I4 520 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SERINC4A6NH21 518 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 EN2P19622 333 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 HTR6P50406 440 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 MAP2K6P52564 334 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SELENOWP63302 87 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 KCNJ10P78508 379 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SYPL1Q16563 259 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 GLYATL3Q5SZD4 288 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SLC12A9Q9BXP2 914 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 NTNG1Q9Y2I2 539 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RIMBP3CA6NJZ7 1639 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RIMBP3BA6NNM3 1639 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RIMBP3Q9UFD9 1639 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 CDK5Q00535 292 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 NPY5RQ15761 445 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SLC5A12Q1EHB4 618 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TIGITQ495A1 244 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ENTHD1Q8IYW4 607 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OR2A1Q8NGT9 310 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ZFPM2Q8WW38 1151 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RDH5Q92781 318 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 RANGRFQ9HD47 186 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF749O43361 778 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SOX18P35713 384 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 EIF1P41567 113 aaKnown RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 MED25Q71SY5 747 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ADGRE4PQ86SQ3 457 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 C20orf85Q9H1P6 137 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 OCEL1Q9H607 264 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 UCK1Q9HA47 277 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 MYO16Q9Y6X6 1858 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 IL2RAP01589 272 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 GUSBP08236 651 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 CTSCP53634 463 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 TNFRSF17Q02223 184 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF141Q15928 474 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 ACOT6Q3I5F7 207 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-216ENST00000555002 C19orf35Q6ZS72 473 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 DCXRQ7Z4W1 244 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 MDGA2Q7Z553 956 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 B3GNT8Q7Z7M8 397 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 FBXL14Q8N1E6 418 aa6.33□□□□□ -1.4
SYNE2-216ENST00000555002 SLC22A24Q8N4F4 322 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms