RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TRAF3IP2O43734 574 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 FMO6PO60774 539 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 UPK3AO75631 287 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF432O94892 652 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 VAMP5O95183 116 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 LGI1O95970 557 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 HPRP00739 348 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CD8AP01732 235 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 BGLAPP02818 100 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OPN1SWP03999 348 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 THY1P04216 161 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 PTNP21246 168 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 GRPRP30550 384 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 GNALP38405 381 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RPS5P46782 204 aaKnown RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 THBS3P49746 956 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF83P51522 516 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CDH11P55287 796 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ATP5J2P56134 94 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CLDN17P56750 224 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RGS8P57771 180 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 NCALDP61601 193 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RPS4XP62701 263 aaKnown RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OR1Q1Q15612 314 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 DUSP7Q16829 419 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CYP51A1Q16850 503 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 TRMT5Q32P41 509 aaKnown RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 COQ5Q5HYK3 327 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ALG10BQ5I7T1 473 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 FAM69AQ5T7M9 428 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C9orf135Q5VTT2 229 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 METTL21CQ5VZV1 264 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 FAM91A1Q658Y4 838 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C11orf71Q6IPW1 123 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 NIPAL3Q6P499 406 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C5orf46Q6UWT4 87 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 NHLRC1Q6VVB1 395 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 WDR88Q6ZMY6 472 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CCDC80Q76M96 950 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 AAED1Q7RTV5 226 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 BIVMQ86UB2 503 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 GPAT4Q86UL3 456 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CALHM3Q86XJ0 350 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RBM45Q8IUH3 476 aaKnown RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ARMC8Q8IUR7 673 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 WDFY1Q8IWB7 410 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 UBE2J2Q8N2K1 259 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 KDM8Q8N371 416 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 POMGNT2Q8NAT1 580 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C11orf65Q8NCR3 313 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OR6T1Q8NGN1 323 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OR1K1Q8NGR3 316 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OR6S1Q8NH40 331 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 OR10A6Q8NH74 314 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 BCAS4Q8TDM0 211 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 SMAP2Q8WU79 429 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C10orf82Q8WW14 230 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 DNAJA4Q8WW22 397 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 SLC38A4Q969I6 547 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 TAAR8Q969N4 342 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 SLC25A36Q96CQ1 311 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 SLC41A3Q96GZ6 507 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 C18orf12Q96KH6 178 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM43Q9BTV4 400 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 TRAF4Q9BUZ4 470 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 LINC00470Q9BZP3 86 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 HIPK2Q9H2X6 1198 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CXorf56Q9H5V9 222 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CCDC134Q9H6E4 229 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ARMC7Q9H6L4 198 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 KAT8Q9H7Z6 458 aaKnown RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 EVA1AQ9H8M9 152 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 NGBQ9NPG2 151 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 CRNNQ9UBG3 495 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 UPB1Q9UBR1 384 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 LAMP3Q9UQV4 416 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 AMDHD2Q9Y303 409 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 UBE2J1Q9Y385 318 aaPredicted RBP3.6□□□□□ -1.83
VTI1B-203ENST00000554636 RTTNQ86VV8 2226 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 NF1P21359 2839 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 HIVEP2P31629 2446 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ABCA2Q9BZC7 2435 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 ANK2Q01484 3957 aa3.6□□□□□ -1.83
VTI1B-203ENST00000554636 A0A096LNT2 108 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 IGHV1-18A0A0C4DH31 117 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 LOC102725191A0A1B0GVB3 256 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 PRORSD1PA6NEY8 169 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CCT8L1PA6NM43 557 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CPSF4LA6NMK7 179 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 BBIP1A8MTZ0 92 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 FAM220BPB1ANY3 271 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF587BE7ETH6 402 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 LRRN3E7EW58 273 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 RPL36A-HNRNPH2H7BZ11 118 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ARHGEF9O43307 516 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 DHHO43323 396 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CHP2O43745 196 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OR2T1O43869 369 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms