RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TSPAN5P62079 268 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 BASP1P80723 227 aaKnown RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 PON2Q15165 354 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 BCL2A1Q16548 175 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CTRB2Q6GPI1 263 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 OR52E8Q6IFG1 317 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 TFAP2EQ6VUC0 442 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 DCXRQ7Z4W1 244 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CMC1Q7Z7K0 106 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF547Q8IVP9 402 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF461Q8TAF7 563 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SLC7A13Q8TCU3 470 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 PYROXD1Q8WU10 500 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 ING5Q8WYH8 240 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 TFGQ92734 400 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 NEIL2Q969S2 332 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 OXGR1Q96P68 337 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CYP2S1Q96SQ9 504 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 TMEM59Q9BXS4 323 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SRRQ9GZT4 340 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SYT4Q9H2B2 425 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 VCX3BQ9H321 246 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 NECAP2Q9NVZ3 263 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 HRASLS2Q9NWW9 162 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF282Q9UDV7 671 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 WARS2Q9UGM6 360 aaKnown RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CLEC2DQ9UHP7 191 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 NXT1Q9UKK6 140 aaKnown RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 RPL36Q9Y3U8 105 aaKnown RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 L3MBTL1Q9Y468 752 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 HYOU1Q9Y4L1 999 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 TSSC4Q9Y5U2 329 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 V9GYY9 64 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 JCADQ9P266 1359 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 TDRD6O60522 2096 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PRAMEF26H0Y7S4 382 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 MKRN2OSH3BPM6 223 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 SMLR1H3BR10 107 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PRMT5O14744 637 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 EMC8O43402 210 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 ZMPSTE24O75844 475 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PLEKHA8P1O95397 391 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 BRI3O95415 125 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 FGGP02679 453 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 STSP08842 583 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PGAM1P18669 254 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 DDOSTP39656 456 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 GPX6P59796 221 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 RPS14P62263 151 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 VLDLRP98155 873 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 CHRNB3Q05901 458 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 BCL2L1Q07817 233 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 TRAM2Q15035 370 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PRR4Q16378 134 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 KYAT1Q16773 422 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 RGS21Q2M5E4 152 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 CCDC14Q49A88 953 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 FAM151BQ6UXP7 276 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 MTERF4Q7Z6M4 381 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 EID2Q8N6I1 236 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 NECAP1Q8NC96 275 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 NOXO1Q8NFA2 376 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 OR8J2Q8NGG1 315 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 OR5B3Q8NH48 314 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 OR5K2Q8NHB8 316 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 ACER1Q8TDN7 264 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 SMARCD2Q92925 531 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 TMEM80Q96HE8 168 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 SEC22AQ96IW7 307 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 HSFY1Q96LI6 401 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 SERPINB11Q96P15 392 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 ZNF251Q9BRH9 671 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 POTEKPQ9BYX7 375 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 NAA50Q9GZZ1 169 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 SLC38A1Q9H2H9 487 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 Q9H3A6 140 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 ASB8Q9H765 288 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 PATZ1Q9HBE1 687 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 DCDC2Q9UHG0 476 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 NAGKQ9UJ70 344 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 UBQLN1Q9UMX0 589 aaKnown RBP3.52□□□□□ -1.85
SCFD1-211ENST00000554437 FADS3Q9Y5Q0 445 aa3.52□□□□□ -1.85
SCFD1-211ENST00000554437 TMEM213A2RRL7 107 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 FAM231BA6NCW3 169 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 FABP12A6NFH5 140 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 TMEM210A6NLX4 147 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 H7C0C1 242 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 SULT2B1O00204 365 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CDC7O00311 574 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CCL21O00585 134 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 PLPP1O14494 284 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 UGT1A9O60656 530 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 EEDO75530 441 aaKnown RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 LDOC1O95751 146 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CLIC3O95833 236 aa3.51□□□□□ -1.85
SCFD1-211ENST00000554437 CNR1P21554 472 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms