RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TEX47Q8TBZ9 253 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 TMEM54Q969K7 222 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 RBM4BQ9BQ04 359 aaKnown RBP6.68□□□□□ -1.34
ABCD4-220ENST00000553998 EMC6Q9BV81 110 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 KATNB1Q9BVA0 655 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 RBM4Q9BWF3 364 aaKnown RBP6.68□□□□□ -1.34
ABCD4-220ENST00000553998 SEMA6AQ9H2E6 1030 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 PLK3Q9H4B4 646 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 SMURF2Q9HAU4 748 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 C8orf4Q9NR00 106 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 SLC17A5Q9NRA2 495 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 PAPOLBQ9NRJ5 636 aaKnown RBP6.68□□□□□ -1.34
ABCD4-220ENST00000553998 SLC7A10Q9NS82 523 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 USE1Q9NZ43 259 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 GLTPQ9NZD2 209 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 KIF17Q9P2E2 1029 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 REV1Q9UBZ9 1251 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 ZNF346Q9UL40 294 aaKnown RBP6.68□□□□□ -1.34
ABCD4-220ENST00000553998 OAZ3Q9UMX2 235 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 POFUT2Q9Y2G5 429 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 AMDHD2Q9Y303 409 aa6.68□□□□□ -1.34
ABCD4-220ENST00000553998 A0A1W2PR80 420 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 LRP5LA4QPB2 252 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SAC3D1A6NKF1 404 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 H0YHG0 523 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 BHLHE40O14503 412 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 MGRN1O60291 552 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 UPK3AO75631 287 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TRMUO75648 421 aaKnown RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 BAG2O95816 211 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ANPEPP15144 967 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 PAX7P23759 505 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 NOS3P29474 1203 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 IL2RGP31785 369 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SERPINF1P36955 418 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 PPOXP50336 477 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 DAPP51397 102 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 IDH3GP51553 393 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ZNF133P52736 654 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 FOXG1P55316 489 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 CLRN1P58418 232 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 HILS1P60008 231 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SNRPD2P62316 118 aaKnown RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ESRRGP62508 458 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ROR2Q01974 943 aaKnown RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 LGALS3BPQ08380 585 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TOP3AQ13472 1001 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 CAMK2DQ13557 499 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 KRR1Q13601 381 aaKnown RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 RIN1Q13671 783 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 RCN1Q15293 331 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 HIST3H3Q16695 136 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SLC36A3Q495N2 470 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 NRN1LQ496H8 165 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 THEM4Q5T1C6 240 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ZNF627Q7L945 461 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 IGFN1Q86VF2 1251 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 CCDC36Q8IYA8 594 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ZNF786Q8N393 782 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 MAGEE2Q8TD90 523 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 GCDHQ92947 438 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 NMD3Q96D46 503 aaKnown RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 FBXO17Q96EF6 278 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SAMD8Q96LT4 415 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ZNF570Q96NI8 536 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ALKBH3Q96Q83 286 aaPredicted RBP6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TSPAN32Q96QS1 320 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 RBP7Q96R05 134 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 C9orf16Q9BUW7 83 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 IFT27Q9BW83 186 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TSSK6Q9BXA6 273 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TEX12Q9BXU0 123 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ULBP2Q9BZM5 246 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 EGLN3Q9H6Z9 239 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 DCLRE1BQ9H816 532 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 CRLF2Q9HC73 371 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TBC1D23Q9NUY8 699 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 ADAM18Q9Y3Q7 739 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 SPEF1Q9Y4P9 236 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 IER3IP1Q9Y5U9 82 aa6.67□□□□□ -1.34
ABCD4-220ENST00000553998 TEX13CA0A0J9YWL9 993 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 PRSS37A4D1T9 235 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 ATP6V1G2-DDX39BF2Z307 99 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 H3BN98 237 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 M0R3G1 203 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 DHHO43323 396 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 SOX14O95416 240 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 PPP1R3DO95685 299 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 IFNGP01579 166 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 IGHV3-9P01782 118 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 HMGN1P05114 100 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 ALPLP05186 524 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 HOXB1P14653 301 aaPredicted RBP6.66□□□□□ -1.34
ABCD4-220ENST00000553998 CDH2P19022 906 aaPredicted RBP6.66□□□□□ -1.34
ABCD4-220ENST00000553998 APEX1P27695 318 aaKnown RBP6.66□□□□□ -1.34
ABCD4-220ENST00000553998 GRK5P34947 590 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 GIPRP48546 466 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 ALDH3A2P51648 485 aa6.66□□□□□ -1.34
ABCD4-220ENST00000553998 CRISP1P54107 249 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms