RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CBX1P83916 185 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 RUNX1T1Q06455 604 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 LSAMPQ13449 338 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 DAG1Q14118 895 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 RAB35Q15286 201 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 MICAQ29983 383 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PGBD2Q6P3X8 592 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PGM2L1Q6PCE3 622 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 ARL9Q6T311 187 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 SPNS3Q6ZMD2 512 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 SKA3Q8IX90 412 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 C10orf67Q8IYJ2 551 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 LRRC18Q8N456 261 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 LRRC75AQ8NAA5 344 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 AQP11Q8NBQ7 271 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 OR10G2Q8NGC3 310 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF519Q8TB69 540 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 GIPC3Q8TF64 312 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 CANT1Q8WVQ1 401 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 NEUROG1Q92886 237 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 FBXO17Q96EF6 278 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 Q96M85 177 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 GPX7Q96SL4 187 aaPredicted RBP7.24□□□□□ -1.25
PSEN1-209ENST00000553855 SH3GL3Q99963 347 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 CADM1Q9BY67 442 aaKnown RBP7.24□□□□□ -1.25
PSEN1-209ENST00000553855 NELFAQ9H3P2 528 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 NRIP3Q9NQ35 241 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 TBC1D23Q9NUY8 699 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 KIF17Q9P2E2 1029 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 DUSP13Q9UII6 198 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 POMPQ9Y244 141 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 POLR1DQ9Y2S0 133 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 ADAM18Q9Y3Q7 739 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 CMAHPQ9Y471 501 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 CDH10Q9Y6N8 788 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 U3KQV3 271 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 MPDZO75970 2070 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 IGHV2OR16-5A0A0B4J2B6 119 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 B9A039 149 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 E7EQL1 145 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 H3BN98 237 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 H7C1C5 153 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ARPC3O15145 178 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SLC16A7O60669 478 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 TXNDC12O95881 172 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 IFNGP01579 166 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SERPINA5P05154 406 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SOD3P08294 240 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CST2P09228 141 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 FUT4P22083 530 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CCNOP22674 350 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CDAP32320 146 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SERPINF1P36955 418 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 GSSP48637 474 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 GDI2P50395 445 aaKnown RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF133P52736 654 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 LCN6P62502 163 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 RPL11P62913 178 aaKnown RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 FMODQ06828 376 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SPOCK1Q08629 439 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SCRN3Q0VDG4 424 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 COX10Q12887 443 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SNTB2Q13425 540 aaKnown RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 RAB39AQ14964 217 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ETFDHQ16134 617 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SLC36A3Q495N2 470 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 IQCCQ4KMZ1 466 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 MESTQ5EB52 335 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 Q5PR19 223 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 KRT80Q6KB66 452 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 LEG1Q6P5S2 330 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SLC25A47Q6Q0C1 308 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 PRSS57Q6UWY2 283 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF620Q6ZNG0 422 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 RASSF6Q6ZTQ3 369 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 YTHDF3Q7Z739 585 aaKnown RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 DTX2Q86UW9 622 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 ADGRG5Q8IZF4 528 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SLC30A7Q8NEW0 376 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 NUP37Q8NFH4 326 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 OR10H5Q8NGA6 315 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 OR9Q2Q8NGE9 314 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 LILRB1Q8NHL6 650 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 TEX47Q8TBZ9 253 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 UBE2FQ969M7 185 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 RASD2Q96D21 266 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SAMD8Q96LT4 415 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 FUZQ9BT04 418 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 TRAF4Q9BUZ4 470 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CXXC4Q9H2H0 198 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CDIP1Q9H305 208 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 DYNLRB1Q9NP97 96 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 CA10Q9NS85 328 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 B3GNT2Q9NY97 397 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 PDP1Q9P0J1 537 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-209ENST00000553855 DNAJB9Q9UBS3 223 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 IL20RAQ9UHF4 553 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 SLC7A8Q9UHI5 535 aa7.23□□□□□ -1.25
PSEN1-209ENST00000553855 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms