RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 B3GALT5Q9Y2C3 310 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 R4GMQ9 66 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 U3KQ87 197 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ARID1BQ8NFD5 2236 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 CACNA1CQ13936 2221 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 A0A1W2PNV4 684 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 VSTM2BA6NLU5 285 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 NPIPA5E9PKD4 350 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 MELTFP08582 738 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 IGFBP3P17936 291 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ACHEP22303 614 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 POU3F4P49335 361 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 RAP2BP61225 183 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 TMEM244Q5VVB8 128 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF626Q68DY1 528 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 TMEM225Q6GV28 225 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 MEIOBQ8N635 442 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SLC26A10Q8NG04 563 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 OR6M1Q8NGM8 313 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 OR10AC1Q8NH08 325 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 CEP76Q8TAP6 659 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ASB5Q8WWX0 329 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 ASB10Q8WXI3 467 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 KCNK17Q96T54 332 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 CLEC4MQ9H2X3 399 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SDHAF3Q9NRP4 125 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 NPIPA1Q9UND3 350 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 LRP12Q9Y561 859 aa11.59□□□□□ -0.55
SHMT2-205ENST00000553474 FREM3P0C091 2139 aa11.58□□□□□ -0.55
SHMT2-205ENST00000553474 WDR87Q6ZQQ6 2873 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 KIF26BQ2KJY2 2108 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ALPK2Q86TB3 2170 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 IGLV3-32A0A0A0MS00 114 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 A0A1B0GTH9 108 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ARPC1BO15143 372 aaKnown RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 GMFGO60234 142 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 NOS1APO75052 506 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 SRSF10O75494 262 aaKnown RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 IFNA7P01567 189 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 HPXP02790 462 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 HEXBP07686 556 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ITGA5P08648 1049 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 UBCP0CG48 685 aaKnown RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 AKAIN1P0CW23 69 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 DHODHQ02127 395 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 PCGF3Q3KNV8 242 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 LINC00303Q3SY05 128 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 NKAIN1Q4KMZ8 207 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 TMEM255AQ5JRV8 349 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 PEAR1Q5VY43 1037 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-205ENST00000553474 MTFR2Q6P444 385 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 LRRC69Q6ZNQ3 347 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 SLC35D2Q76EJ3 337 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 RHOUQ7L0Q8 258 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 HDDC2Q7Z4H3 204 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 PRSS58Q8IYP2 241 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ANGPTL6Q8NI99 470 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 LOXL4Q96JB6 756 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 MRGPRX4Q96LA9 322 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 SORCS2Q96PQ0 1159 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 NUDT22Q9BRQ3 303 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 TMPRSS13Q9BYE2 586 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 CHST11Q9NPF2 352 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 SLC22A11Q9NSA0 550 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 ALKBH4Q9NXW9 302 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 NKIRAS2Q9NYR9 191 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 CABIN1Q9Y6J0 2220 aa11.58□□□□□ -0.56
SHMT2-205ENST00000553474 LAMA1P25391 3075 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 A0A087WV48 116 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 CIB4A0PJX0 185 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 MS4A18H0YCH9 400 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 ALOX12BO75342 701 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR2A4O95047 310 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 GABRA1P14867 456 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 HTR2CP28335 458 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 PRSS3P35030 304 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 MMP16P51512 607 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 ZP1P60852 638 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 MS4A18Q3C1V0 323 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 C2orf76Q3KRA6 126 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 SLC25A25Q6KCM7 469 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 FAM198BQ6UWH4 519 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 NDUFAF7Q7L592 441 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 BMPERQ8N8U9 685 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 UXS1Q8NBZ7 420 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 BEST4Q8NFU0 473 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR51D1Q8NGF3 324 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR8H1Q8NGG4 311 aa11.57□□□□□ -0.56
SHMT2-205ENST00000553474 OR1J4Q8NGS1 313 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms