RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 OTOSQ8NHW6 89 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 CASTOR1Q8WTX7 329 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 FCAMRQ8WWV6 532 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 C11orf40Q8WZ69 217 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SLC25A38Q96DW6 304 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 DDOQ99489 341 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 OR51B6Q9H340 312 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 INPP5EQ9NRR6 644 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 STMN3Q9NZ72 180 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MYOTQ9UBF9 498 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MGAQ8IWI9 3026 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 OTOGLQ3ZCN5 2332 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 C5orf63A6NC05 138 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MS4A18H0YCH9 400 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 PDCD5O14737 125 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 FADS1O60427 444 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 CD2P06729 351 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ITGA5P08648 1049 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 CCL3P10147 92 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF43P17038 809 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ANOS1P23352 680 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SLC26A5P58743 744 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 TAS2R20P59543 309 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 C17orf67Q0P5P2 114 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 PDCD1Q15116 288 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 POU4F3Q15319 338 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ZMYND11Q15326 602 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MS4A18Q3C1V0 323 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SLC36A2Q495M3 483 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 C4orf46Q504U0 113 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 NHLRC1Q6VVB1 395 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 LINC00696Q6ZRV3 163 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 H1FNTQ75WM6 255 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-215ENST00000552823 GALNTL5Q7Z4T8 443 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ABHD12BQ7Z5M8 362 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF227Q86WZ6 799 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SLITRK4Q8IW52 837 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 OR51E1Q8TCB6 317 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ROBO4Q8WZ75 1007 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 DNASE2BQ8WZ79 361 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ITPKCQ96DU7 683 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 LIN37Q96GY3 246 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-215ENST00000552823 C4orf45Q96LM5 186 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 RASL10BQ96S79 203 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 CHST6Q9GZX3 395 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 ADAM19Q9H013 955 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 TXNIPQ9H3M7 391 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 PTGES2Q9H7Z7 377 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 HRASLSQ9HDD0 168 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 MGAT4CQ9UBM8 478 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SLC5A6Q9Y289 635 aa5.01□□□□□ -1.61
LIMA1-215ENST00000552823 SPTBN1Q01082 2364 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 LOC107986453A0A1B0GWG9 222 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 FAM47E-STBD1D6RA91 191 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SYT7O43581 403 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 RBBP9O75884 186 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 UBL3O95164 117 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 HLA-DQB1P01920 261 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 ALDOBP05062 364 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 STOMP27105 288 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DPP4P27487 766 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 UQCRC1P31930 480 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NUDT1P36639 197 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 GUCA1AP43080 201 aaPredicted RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 CCR9P51686 369 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 CLDN20P56880 219 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 RPS4XP62701 263 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 FAPQ12884 760 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SGCBQ16585 318 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 MOGAT2Q3SYC2 334 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 KCTD18Q6PI47 426 aaPredicted RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 FAM198BQ6UWH4 519 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 TPRA1Q86W33 373 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 C17orf82Q86X59 251 aaPredicted RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 CDC20BQ86Y33 519 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 PLCZ1Q86YW0 608 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 UEVLDQ8IX04 471 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DND1Q8IYX4 353 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 SYS1Q8N2H4 156 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 BOLLQ8N9W6 283 aaKnown RBP5□□□□□ -1.61
LIMA1-215ENST00000552823 OR11H7Q8NGC8 314 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR51S1Q8NGJ8 323 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 OR2AJ1Q8NGZ0 328 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SAP25Q8TEE9 199 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NUDCD2Q8WVJ2 157 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 FAM3DQ96BQ1 224 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 ZNF285Q96NJ3 590 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 DCBLD2Q96PD2 775 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 MNTQ99583 582 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SPSB2Q99619 263 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 C1QTNF6Q9BXI9 259 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NMNAT2Q9BZQ4 307 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 IRF2BPLQ9H1B7 796 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 NOX3Q9HBY0 568 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 HAO2Q9NYQ3 351 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 PLA2G3Q9NZ20 509 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 FBXO4Q9UKT5 387 aa5□□□□□ -1.61
LIMA1-215ENST00000552823 SRPK3Q9UPE1 567 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms