RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PGA3P0DJD8 388 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 LAP3P28838 519 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 BTCP35070 178 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 ART1P52961 327 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 DSCR4P56555 118 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 CLRN1P58418 232 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 RPS18P62269 152 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SLC35A1P78382 337 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 CAMK2DQ13557 499 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 ANGPT1Q15389 498 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TMPPEQ6ZT21 453 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 RAB11FIP2Q7L804 512 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 GPAT4Q86UL3 456 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SIAH3Q8IW03 269 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 OR1J4Q8NGS1 313 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 OR6X1Q8NH79 312 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 MIB2Q96AX9 1013 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 STEAP1Q9UHE8 339 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 DHDHQ9UQ10 334 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 EMC9Q9Y3B6 208 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 PCDHGA5Q9Y5G8 931 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 DMDP11532 3685 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 CENPXA8MT69 81 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 H0YC42 278 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 SULT1B1O43704 296 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ZIC3O60481 467 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ICAM2P13598 275 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 TCN2P20062 427 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CFPP27918 469 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 OTX2P32243 289 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 SCAND1P57086 179 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 GPR85P60893 370 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 BTG1P62324 171 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CCDC157Q569K6 752 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CORO6Q6QEF8 472 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 LINGO2Q7L985 606 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 HDDC2Q7Z4H3 204 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF227Q86WZ6 799 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 SERPINA12Q8IW75 414 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ASB5Q8WWX0 329 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 HAVCR1Q96D42 359 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PLEKHA1Q9HB21 404 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 G6PC2Q9NQR9 355 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PAIP2BQ9ULR5 123 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PMS2P1A4D2B8 440 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 TTLL8A6PVC2 850 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 G3V3Y1 287 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 RAMP1O60894 148 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PMS2P2O95744 297 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 H2BFMP0C1H6 154 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF43P17038 809 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 PTH2RP49190 550 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 TIGD3Q6B0B8 471 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 ASPHD2Q6ICH7 369 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 LRFN4Q6PJG9 635 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 SLC25A47Q6Q0C1 308 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 N6AMT1Q9Y5N5 214 aa12.49□□□□□ -0.41
RAB3IP-216ENST00000552199 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 ISG15P05161 165 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 CD59P13987 128 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 KLK2P20151 261 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 MNDAP41218 407 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 Q0VFX4 171 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 DYRK1AQ13627 763 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 KLF9Q13886 244 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 SSPNQ14714 243 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 MTFR2Q6P444 385 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 DDA1Q9BW61 102 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 DPAGT1Q9H3H5 408 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 HHLA2Q9UM44 414 aa12.48□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM269A0A1B0GVZ9 245 aa12.47□□□□□ -0.41
RAB3IP-216ENST00000552199 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms