RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 SGCDQ92629 289 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 RAD21L1Q9H4I0 556 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 RMND5AQ9H871 391 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 NANSQ9NR45 359 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
CACNB3-220ENST00000551716 SLC13A4Q9UKG4 626 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 RAP2CQ9Y3L5 183 aa12.73□□□□□ -0.37
CACNB3-220ENST00000551716 TANC2Q9HCD6 1990 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 XPNPEP2O43895 674 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 IGHV4-59P01825 116 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 KITLGP21583 273 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 MMP16P51512 607 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF133P52736 654 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-220ENST00000551716 CDH12P55289 794 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 PCBD1P61457 104 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 PSG4Q00888 419 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 C10orf128Q5T292 105 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 DHRS7BQ6IAN0 325 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-220ENST00000551716 NUDCD3Q8IVD9 361 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 C1orf87Q8N0U7 546 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF781Q8N8C0 355 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 EPS8L3Q8TE67 593 aaKnown RBP12.72□□□□□ -0.37
CACNB3-220ENST00000551716 OR2V2Q96R30 315 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF607Q96SK3 696 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 SEPHS2Q99611 448 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 TMEM246Q9BRR3 403 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 MRPL13Q9BYD1 178 aaKnown RBP12.72□□□□□ -0.37
CACNB3-220ENST00000551716 SMURF2Q9HAU4 748 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 TIMM10BQ9Y5J6 103 aa12.72□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF816-ZNF321PA0A0X1KG74 233 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 GMNCA6NCL1 334 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 BTBD17A6NE02 478 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 H0YL77 283 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 TOX4O94842 621 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 THRBP10828 461 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 NR2C1P13056 603 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 IL12AP29459 219 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 TGFBR2P37173 567 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 GUCA1AP43080 201 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 NPY4RP50391 375 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 HNRNPA0Q13151 305 aaKnown RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 FADDQ13158 208 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 MELKQ14680 651 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 RGNQ15493 299 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF74Q16587 644 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 FAM27BQ5VT28 67 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 HHATQ5VTY9 493 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 WDR25Q64LD2 544 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 RANBP3LQ86VV4 465 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 UBLCP1Q8WVY7 318 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-220ENST00000551716 C10orf82Q8WW14 230 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ITCHQ96J02 903 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 COG8Q96MW5 612 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF347Q96SE7 839 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 TBCCD1Q9NVR7 557 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 AIG1Q9NVV5 245 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
CACNB3-220ENST00000551716 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.38
CACNB3-220ENST00000551716 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.38
CACNB3-220ENST00000551716 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 MCIDASD6RGH6 385 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 SPAG7O75391 227 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 CH25HO95992 272 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 BMP2P12643 396 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 CFHR2P36980 270 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 SRP9P49458 86 aaKnown RBP12.7□□□□□ -0.38
CACNB3-220ENST00000551716 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
CACNB3-220ENST00000551716 EGR3Q06889 387 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 SGCAQ16586 387 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 ZNF613Q6PF04 617 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 C11orf88Q6PI97 169 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 LINC00114Q6XXX2 140 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 DCDC5Q6ZRR9 648 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 MSANTD1Q6ZTZ1 278 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 NOXO1Q8NFA2 376 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
CACNB3-220ENST00000551716 MAL2Q969L2 176 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 CMBLQ96DG6 245 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 OR2H1Q9GZK4 316 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 MEAF6Q9HAF1 191 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 SLCO1B3Q9NPD5 702 aa12.7□□□□□ -0.38
CACNB3-220ENST00000551716 NDRG4Q9ULP0 352 aaKnown RBP12.7□□□□□ -0.38
CACNB3-220ENST00000551716 CAB39Q9Y376 341 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-220ENST00000551716 FAM96BQ9Y3D0 163 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms