RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SLC25A38Q96DW6 304 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 SLC25A44Q96H78 314 aaPredicted RBP10.24□□□□□ -0.77
RAB5C-208ENST00000551338 ZC3HAV1LQ96H79 300 aaKnown RBP10.24□□□□□ -0.77
RAB5C-208ENST00000551338 ABHD1Q96SE0 405 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 SLITRK2Q9H156 845 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 MMP28Q9H239 520 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 PARD6AQ9NPB6 346 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 G6PC2Q9NQR9 355 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 DEPPQ9NTK1 212 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 CLEC4AQ9UMR7 237 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 GTF2A1LQ9UNN4 478 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 ZNF318Q5VUA4 2279 aa10.24□□□□□ -0.77
RAB5C-208ENST00000551338 ARPC4-TTLL3A0A0A6YYG9 625 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 PINLYPA6NC86 204 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 LYRM1O43325 122 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 UBL3O95164 117 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CALCBP10092 127 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CSRP1P21291 193 aaKnown RBP10.23□□□□□ -0.77
RAB5C-208ENST00000551338 ACHEP22303 614 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 NR4A2P43354 598 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CLDN12P56749 244 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CLDN17P56750 224 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 RAC1P63000 192 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 MFAP5Q13361 173 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 AGAP6Q5VW22 663 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 DEGS2Q6QHC5 323 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 BAIAP2L2Q6UXY1 529 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 PIP4P1Q86T03 277 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 YRDCQ86U90 279 aaKnown RBP10.23□□□□□ -0.77
RAB5C-208ENST00000551338 GLCCI1Q86VQ1 547 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CMTM4Q8IZR5 234 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 DNAAF1Q8NEP3 725 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 HPS1Q92902 700 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 TMEM54Q969K7 222 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 TMEM106AQ96A25 262 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 RFT1Q96AA3 541 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 SLAMF6Q96DU3 332 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 THOC3Q96J01 351 aaKnown RBP10.23□□□□□ -0.77
RAB5C-208ENST00000551338 AGAP4Q96P64 663 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 PIGQQ9BRB3 760 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 GPR87Q9BY21 358 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 SRXN1Q9BYN0 137 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 OR2B2Q9GZK3 357 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 EMC7Q9NPA0 242 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 OR5V1Q9UGF6 321 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 CYB5R1Q9UHQ9 305 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 OR52A1Q9UKL2 312 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 LHFPL6Q9Y693 200 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 USP34Q70CQ2 3546 aa10.23□□□□□ -0.77
RAB5C-208ENST00000551338 MED13Q9UHV7 2174 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 IGHV3-15A0A0B4J1V0 119 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 EIF1AYO14602 144 aaKnown RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 TNFSF15O95150 251 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 MAS1P04201 325 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 H2BFMP0C1H6 154 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 RFPL3SP0C7P2 107 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 PRKAR1AP10644 381 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 FSTP19883 344 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 CFPP27918 469 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 ZNF133P52736 654 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 TPTEP56180 551 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 KCNMB1Q16558 191 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 PHYHD1Q5SRE7 291 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 ZNF57Q68EA5 555 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 CFAP77Q6ZQR2 320 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 FCRLAQ7L513 359 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 TMPRSS12Q86WS5 348 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 UBE2J2Q8N2K1 259 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 ENKURQ8TC29 256 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 YIPF5Q969M3 257 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 ZNF385AQ96PM9 386 aaKnown RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 NAA11Q9BSU3 229 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 THAP7Q9BT49 309 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 MRI1Q9BV20 369 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 C1orf198Q9H425 327 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 CENPMQ9NSP4 180 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 RBFOX1Q9NWB1 397 aaKnown RBP10.22□□□□□ -0.77
RAB5C-208ENST00000551338 CAMK2AQ9UQM7 478 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 EMC9Q9Y3B6 208 aa10.22□□□□□ -0.77
RAB5C-208ENST00000551338 A0A0B4J293 547 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 ZNF726A6NNF4 738 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 TTLL8A6PVC2 850 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 H0YC42 278 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 TNFSF11O14788 317 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 CTDSPLO15194 276 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 SMAD9O15198 467 aaKnown RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 EEF1E1O43324 174 aaKnown RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 DNPH1O43598 174 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 DOK2O60496 412 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 EIF1BO60739 113 aaKnown RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 ANXA2P07355 339 aaKnown RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 QDPRP09417 244 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 IGFBP3P17936 291 aaPredicted RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 CDAP32320 146 aa10.21□□□□□ -0.77
RAB5C-208ENST00000551338 EIF1AXP47813 144 aaKnown RBP10.21□□□□□ -0.77
RAB5C-208ENST00000551338 CSNK1A1P48729 337 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms