RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PCSK6P29122 969 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 NUDT6P53370 316 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 LSM6P62312 80 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 COX10Q12887 443 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 AQP6Q13520 282 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 CLEC12AQ5QGZ9 265 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 UGT2A3Q6UWM9 527 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 CPEB3Q8NE35 698 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 OR8D4Q8NGM9 314 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 OR4K13Q8NH42 304 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 PLA2G12AQ9BZM1 189 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 WNT5BQ9H1J7 359 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 TBC1D23Q9NUY8 699 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 DNAJB9Q9UBS3 223 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 NDRG4Q9ULP0 352 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 FKBP7Q9Y680 259 aa13.29□□□□□ -0.28
PRPF40B-211ENST00000551063 FLNAP21333 2647 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 TRIM64A6NGJ6 449 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 TRIM64BA6NI03 449 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 E2F6O75461 281 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 SCG5P05408 212 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 GAAP10253 952 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 COX5BP10606 129 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 STOMP27105 288 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 APEX1P27695 318 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 RAD52P43351 418 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 GDI2P50395 445 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 EFNA4P52798 201 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 KCNMB1Q16558 191 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 ZBTB46Q86UZ6 589 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 SVOPLQ8N434 492 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 LNX2Q8N448 690 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 PAQR4Q8N4S7 273 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 OR2T33Q8NG76 320 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 OR52E2Q8NGJ4 325 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 AKR7LQ8NHP1 331 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 SLCO4A1Q96BD0 722 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 POM121L2Q96KW2 1035 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 DOK1Q99704 481 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 TSSK6Q9BXA6 273 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 RERGLQ9H628 205 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 B9D1Q9UPM9 204 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 NAV3Q8IVL0 2385 aa13.28□□□□□ -0.28
PRPF40B-211ENST00000551063 H7C1Q1 480 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 DCTN6O00399 190 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 ICMTO60725 284 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 DEAF1O75398 565 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 SOX14O95416 240 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 CSF3P09919 207 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 FAM157BP0CG42 384 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 CCL2P13500 99 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 DSCR9P59020 149 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 GLO1Q04760 184 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 MSMPQ1L6U9 139 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 RGS7BPQ6MZT1 257 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 ZNF774Q6NX45 483 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 UNQ6126/PRO20091Q6UXV3 157 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 OR6V1Q8N148 313 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 NPEPL1Q8NDH3 523 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 FOXN4Q96NZ1 517 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 TSSK2Q96PF2 358 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 SORCS2Q96PQ0 1159 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 FEVQ99581 238 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 NIPSNAP1Q9BPW8 284 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 MRPL37Q9BZE1 423 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 DYNLRB1Q9NP97 96 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 PDP1Q9P0J1 537 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 ATPIF1Q9UII2 106 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 POLR1DQ9Y2S0 133 aa13.27□□□□□ -0.29
PRPF40B-211ENST00000551063 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 LOC100509620A0A075B734 347 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 TMEM129A0AVI4 362 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 OR6C68A6NDL8 312 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 M0R233 179 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 SGCEO43556 437 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 SYNGR3O43761 229 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 SSX4O60224 188 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 DOK2O60496 412 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 ERCC1P07992 297 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 UCP2P55851 309 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 CLEC2AQ6UVW9 174 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 CCDC121Q6ZUS5 278 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 ASRGL1Q7L266 308 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 TMEM179BQ7Z7N9 219 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
PRPF40B-211ENST00000551063 SLC26A10Q8NG04 563 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms