RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LMX1BO60663 402 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZNF432O94892 652 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 PPP1R3DO95685 299 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 BCL10O95999 233 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 IFNGR1P15260 489 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 POU1F1P28069 291 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 RPL4P36578 427 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 NR4A2P43354 598 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 GZMKP49863 264 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 DAP3P51398 398 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 RPS6KA3P51812 740 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 RPL27P61353 136 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 ADARB1P78563 741 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 POU3F1Q03052 451 aaPredicted RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 GINS1Q14691 196 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ADIPOQQ15848 244 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZNF362Q5T0B9 420 aaPredicted RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 SLX4IPQ5VYV7 408 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ACSM5Q6NUN0 579 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 SLC35D2Q76EJ3 337 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 OR6X1Q8NH79 312 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZNF519Q8TB69 540 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ASB10Q8WXI3 467 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 TXNDC15Q96J42 360 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 TSPAN32Q96QS1 320 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 PITX2Q99697 317 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 RIBC2Q9H4K1 309 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 CRLF2Q9HC73 371 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 CRNNQ9UBG3 495 aaPredicted RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 LPAR3Q9UBY5 353 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ZNF346Q9UL40 294 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 NDRG4Q9ULP0 352 aaKnown RBP11.61□□□□□ -0.55
NUP188-211ENST00000550219 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ADAM18Q9Y3Q7 739 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 IER3IP1Q9Y5U9 82 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 ABCA1O95477 2261 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 M0R3G1 203 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 SERPINI2O75830 405 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 SDHAP31040 664 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 GRK5P34947 590 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 AQP4P55087 323 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 EFNB1P98172 346 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 SNTB2Q13425 540 aaKnown RBP11.6□□□□□ -0.55
NUP188-211ENST00000550219 TMEM236Q5W0B7 351 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 C12orf73Q69YU5 71 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 FAM166AQ6J272 317 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 MDP1Q86V88 176 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 OR4F15Q8NGB8 312 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 TMEM158Q8WZ71 300 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 ZNF837Q96EG3 531 aaPredicted RBP11.6□□□□□ -0.55
NUP188-211ENST00000550219 BOD1Q96IK1 185 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 Q96M85 177 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 FOXN4Q96NZ1 517 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 ERMAPQ96PL5 475 aaPredicted RBP11.6□□□□□ -0.55
NUP188-211ENST00000550219 OR2M2Q96R28 347 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 DDOQ99489 341 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 EMC6Q9BV81 110 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 MRPL13Q9BYD1 178 aaKnown RBP11.6□□□□□ -0.55
NUP188-211ENST00000550219 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 DYNLRB1Q9NP97 96 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 MED29Q9NX70 200 aa11.6□□□□□ -0.55
NUP188-211ENST00000550219 IGHV2OR16-5A0A0B4J2B6 119 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 LOC100289279A0A1B0GTE1 492 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 LOC100130705A0A1B0GUX0 176 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 SLC35F4A4IF30 521 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 A6NIZ1 184 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 VWC2LB2RUY7 222 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 H0YAE9 185 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 NDUFS8O00217 210 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 AHCYL1O43865 530 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 TRMUO75648 421 aaKnown RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 IGKV3-15P01624 115 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 HMGN1P05114 100 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 HIST1H1CP16403 213 aaKnown RBP11.59□□□□□ -0.55
NUP188-211ENST00000550219 PAX7P23759 505 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 THBS4P35443 961 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 PPOXP50336 477 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 BIDP55957 195 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 RAP1BP61224 184 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 RAP1AP62834 184 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 MYBPC1Q00872 1141 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 RUNX1T1Q06455 604 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 EFNB3Q15768 340 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 MESTQ5EB52 335 aa11.59□□□□□ -0.55
NUP188-211ENST00000550219 PHYHD1Q5SRE7 291 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms