RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 MT-ND1P03886 318 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 F13BP05160 661 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 FUT1P19526 365 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 CDAP32320 146 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 CD80P33681 288 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 DAP3P51398 398 aaKnown RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 STX1BP61266 288 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 TNFAIP6P98066 277 aaPredicted RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 PAX2Q02962 417 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 RPL18Q07020 188 aaKnown RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 PSG7Q13046 419 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 MIDNQ504T8 468 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 MTX3Q5HYI7 312 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 SPATA46Q5T0L3 261 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 LEG1Q6P5S2 330 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 C16orf87Q6PH81 154 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 SLC25A47Q6Q0C1 308 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 ARL9Q6T311 187 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 NANOGNBQ7Z5D8 188 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 RBM45Q8IUH3 476 aaKnown RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 SLC30A8Q8IWU4 369 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 NOXO1Q8NFA2 376 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 GEMIN6Q8WXD5 167 aaKnown RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 TMIGD2Q96BF3 282 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 C4orf45Q96LM5 186 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 CPPED1Q9BRF8 314 aaPredicted RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 MRI1Q9BV20 369 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 MS4A7Q9GZW8 240 aaPredicted RBP8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 PRDM13Q9H4Q3 707 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 ELOVL3Q9HB03 270 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 INIPQ9NRY2 104 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 TMEM106BQ9NUM4 274 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 DCAF16Q9NXF7 216 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 IL20RAQ9UHF4 553 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 TIMM10BQ9Y5J6 103 aa8.29□□□□□ -1.08
TRAFD1-207ENST00000550051 VWFP04275 2813 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 A0A1B0GUS0 222 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 GMNCA6NCL1 334 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 MCIDASD6RGH6 385 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 PLATP00750 562 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 VIMP08670 466 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 CST2P09228 141 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 WNT2P09544 360 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 UMPSP11172 480 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 TNFRSF1AP19438 455 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 AQP2P41181 271 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 RBM34P42696 430 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 IDH3AP50213 366 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 ARHGDIAP52565 204 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 PCBD1P61457 104 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 SGCAQ16586 387 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 RFPL4BQ6ZWI9 263 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 SYT9Q86SS6 491 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 PATL1Q86TB9 770 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 OR52E2Q8NGJ4 325 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 ABHD4Q8TB40 342 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 FNDC8Q8TC99 324 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 HDAC2Q92769 488 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 UPRTQ96BW1 309 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 SIGLEC11Q96RL6 698 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 WACQ9BTA9 647 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 CCDC28BQ9BUN5 200 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 PARD6BQ9BYG5 372 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 OR2H1Q9GZK4 316 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 WNT5BQ9H1J7 359 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 TXNIPQ9H3M7 391 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 NANOGQ9H9S0 305 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 MSL2Q9HCI7 577 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 MAN2C1Q9NTJ4 1040 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 TBCCD1Q9NVR7 557 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 IL19Q9UHD0 177 aa8.28□□□□□ -1.08
TRAFD1-207ENST00000550051 IGKV1D-43A0A0B4J1Z2 117 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 HTR3EA5X5Y0 456 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 IFNL4K9M1U5 179 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 KPNA4O00629 521 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 POLR3GO15318 223 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 OR7A10O76100 309 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 SLC2A10O95528 541 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 FSTL3O95633 263 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 COX5BP10606 129 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 NR2C1P13056 603 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 CD247P20963 164 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 KITLGP21583 273 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 MDKP21741 143 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 TNFSF4P23510 183 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 SEC61A1P61619 476 aaKnown RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 BTG1P62324 171 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 ERVK-25P63136 954 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 LAPTM4AQ15012 233 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 ZMYND11Q15326 602 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 TAF11Q15544 211 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 ESCO2Q56NI9 601 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 ZNF362Q5T0B9 420 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 LRRN1Q6UXK5 716 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms