RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 DNAJB9Q9UBS3 223 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 CMAHPQ9Y471 501 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 IGLV1-36A0A0B4J1U3 117 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TMEM129A0AVI4 362 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 OR6C68A6NDL8 312 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 ARRDC5A6NEK1 342 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TRIM64BA6NI03 449 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 E2F6O75461 281 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 SOX14O95416 240 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 SNAP29O95721 258 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TP53P04637 393 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 STOMP27105 288 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 APLNRP35414 380 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 CLEC12BQ2HXU8 276 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 C1orf146Q5VVC0 180 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 DNM1P34Q6PK57 102 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 CD300LDQ6UXZ3 194 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 ASRGL1Q7L266 308 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 SYT9Q86SS6 491 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 SVOPLQ8N434 492 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 SDR9C7Q8NEX9 313 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 POM121L2Q96KW2 1035 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 WACQ9BTA9 647 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TSSK6Q9BXA6 273 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 RPRD1BQ9NQG5 326 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 TBC1D23Q9NUY8 699 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 PDP1Q9P0J1 537 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 B9D1Q9UPM9 204 aa16.14■□□□□ 0.17
PRPF40B-206ENST00000547764 LOC100509620A0A075B734 347 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 SSX4O60224 188 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 GPANK1O95872 356 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 FAM157BP0CG42 384 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 CCNOP22674 350 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 CENPAP49450 140 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 RPS23P62266 143 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 COX10Q12887 443 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 ZNF774Q6NX45 483 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 CCDC121Q6ZUS5 278 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 ALDH16A1Q8IZ83 802 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 HS3ST5Q8IZT8 346 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 LNX2Q8N448 690 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 NPEPL1Q8NDH3 523 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 C11orf40Q8WZ69 217 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 MRPL24Q96A35 216 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 DDOQ99489 341 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 DOK1Q99704 481 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 BDH2Q9BUT1 245 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 MRPL37Q9BZE1 423 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 OR51B6Q9H340 312 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 FN3KQ9H479 309 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 ARMC1Q9NVT9 282 aa16.13■□□□□ 0.17
PRPF40B-206ENST00000547764 C5orf49A4QMS7 147 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 TIPRLO75663 272 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 GAAP10253 952 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 FOSL1P15407 271 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 PCSK6P29122 969 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 GDI2P50395 445 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 NUDT6P53370 316 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 LSM6P62312 80 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 SCRN3Q0VDG4 424 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 KCNMB1Q16558 191 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 ZNF362Q5T0B9 420 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 ZBTB46Q86UZ6 589 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 CIARTQ8N365 385 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 OR4Q3Q8NH05 313 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 C18orf12Q96KH6 178 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 RACGAP1Q9H0H5 632 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 NTN4Q9HB63 628 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 REV1Q9UBZ9 1251 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 FZR1Q9UM11 496 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 FKBP7Q9Y680 259 aa16.12■□□□□ 0.17
PRPF40B-206ENST00000547764 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 H7C1Q1 480 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 PRKACGP22612 351 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 RAD52P43351 418 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 PPOXP50336 477 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 EFNA4P52798 201 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 UCP2P55851 309 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 TNK1Q13470 666 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 AQP6Q13520 282 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 CCNIQ14094 377 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 MEP1BQ16820 701 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 SLC36A3Q495N2 470 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 DNM1P46Q6ZS02 220 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 LRP11Q86VZ4 500 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 CYB561A3Q8NBI2 242 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 OR2T33Q8NG76 320 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 UTP4Q969X6 686 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 SORCS2Q96PQ0 1159 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 VRK1Q99986 396 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 SYT3Q9BQG1 590 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 ASH2LQ9UBL3 628 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 BAIAP2Q9UQB8 552 aa16.11■□□□□ 0.17
PRPF40B-206ENST00000547764 SGCEO43556 437 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 DEAF1O75398 565 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 CIB2O75838 187 aa16.1■□□□□ 0.17
PRPF40B-206ENST00000547764 LY6HO94772 140 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms