RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C5orf42Q9H799 3197 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 A0A0A6YYC8 382 aaPredicted RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 PRSS37A4D1T9 235 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FAM74A7A6NL05 159 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 I3L1I5 382 aaPredicted RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 M0QYG6 137 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 EIF1AYO14602 144 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 HCRTR1O43613 425 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 NSA2O95478 260 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 PLATP00750 562 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 MT-ATP6P00846 226 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 BGLAPP02818 100 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZBTB25P24278 435 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 RORAP35398 523 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 CASRP41180 1078 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 RIDAP52758 137 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 PMPCAQ10713 525 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 SERTAD2Q14140 314 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ELOCQ15369 112 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FAM74A3Q4VXF1 159 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FAM74A1Q5RGS3 127 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 C1orf100Q5SVJ3 147 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ELP2Q6IA86 826 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 MED25Q71SY5 747 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 SPRED2Q7Z698 418 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZNF584Q8IVC4 421 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 SVBPQ8N300 66 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 C19orf47Q8N9M1 422 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 GATSQ8NAP1 163 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZSCAN1Q8NBB4 408 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 STOML3Q8TAV4 291 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 MITD1Q8WV92 249 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 TAAR8Q969N4 342 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 LAT2Q9GZY6 243 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 VSX1Q9NZR4 365 aaPredicted RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 MSRAQ9UJ68 235 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 B9D1Q9UPM9 204 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 THADAQ6YHU6 1953 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 TRAV36DV7A0A075B6V5 113 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 A0A1W2PQF6 199 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 SULT2B1O00204 365 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 IGHMP01871 453 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FBXO45P0C2W1 286 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 HOXB2P14652 356 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ST6GAL1P15907 406 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 GDI1P31150 447 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 RPS27P42677 84 aaKnown RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 KCNAB1Q14722 419 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 GLYATL3Q5SZD4 288 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 PRAMEF17Q5VTA0 474 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZNF563Q8TA94 476 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 ZNF519Q8TB69 540 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 PPP1R1CQ8WVI7 109 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 C8orf44Q96CB5 159 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FOXRED1Q96CU9 486 aaPredicted RBP7.88□□□□□ -1.15
TDP1-204ENST00000545686 LMF1Q96S06 567 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 PHB2Q99623 299 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 FAM60AQ9NP50 221 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 TAS2R4Q9NYW5 299 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 KLK13Q9UKR3 277 aa7.88□□□□□ -1.15
TDP1-204ENST00000545686 IGLV1-36A0A0B4J1U3 117 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 FGF16O43320 207 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ALOX12BO75342 701 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SCGNO76038 276 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 UTS2O95399 124 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 PNPP00491 289 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 HLA-DQA2P01906 255 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ISG15P05161 165 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 TBPP20226 339 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 COL9A1P20849 921 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 PPICP45877 212 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ARRB1P49407 418 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 PRKXP51817 358 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 RPL27P61353 136 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 SGCBQ16585 318 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 DEFB110Q30KQ9 67 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 RNASE10Q5GAN6 216 aaKnown RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 TMEM240Q5SV17 173 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SHEQ5VZ18 495 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ARMC6Q6NXE6 501 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 CBLN3Q6UW01 205 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ZNF813Q6ZN06 617 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 MAMDC2Q7Z304 686 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
TDP1-204ENST00000545686 THAP6Q8TBB0 222 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC37A2Q8TED4 501 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 PATE1Q8WXA2 126 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 METTL21AQ8WXB1 218 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 AQP3Q92482 292 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 ZNF75AQ96N20 296 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC6A7Q99884 636 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 NUDT9Q9BW91 350 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 GMEB2Q9UKD1 530 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 HHLA2Q9UM44 414 aa7.87□□□□□ -1.15
TDP1-204ENST00000545686 SLC22A13Q9Y226 551 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms